Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00087 ATGTTCTCTGCTTTGATTCAACCCCACGAACCCATTGTTCCTCAGGAAGAGATTCAGGGTTCGAATCACCGTGGTGACCCTTGCTTGGTCCTCACTTCAGATCCCAAACCTCGTCTTCGATGGACTGCAGAGCTGCATGAACGTTTCGTTGATGCCGTCACTCAGCTTGGAGGAGCTGATAAAGCAACACCAAAGTCTATCATGCGGACAATGGGTGTGAAAGGACTTACGCTTTTTCACTTAAAAAGTCACCTTCAGAAATACAGACTTGGTAAGCAATCAGGGAAGGATTTGACTGAGGGACCTAAAGATGGAACCTCAGCTTCATACCTTTTGGATAGCCCAGGCACGGGTACTTCGTCTCCGAGCTTGCCGACTTCCGATATGAATGAGGGCTATGAAGTCAAGGAGGCATTAAGAGCCCAAATGGAAGTGCAGAGACAACTCCATCTACAAGTTGAAGTTGAGAAGCATGTGCAGATTCGCAAGGATGCGGAGCAAAGATACTTTGAATCCATGCTTGAGAAAGCATGTAAGATGCTTGATGATCAAACCCTGGGGGCTGCAGTAACAGAGTGCCATGACCTTTCTGGACTGGCAATGAAGTTGTCAGCAAGAATCTCCTTGAATGACCCTCTGAGCTTCTATTCTTTATGTCCAGCTGGAGCAGTCAGAGTACACATCCCCGAAGACGAGCATCGTGGTCTGCAGCCACAAAGGGCTGATTGTTCCAATGAAAGCTGCCTGACTTCACATGGTAGCCCAGCAACACTGTCTTTGGAGACGTCTCCAGCAGGGGGGACGAAAAGGGTGCGGAACTTGGACTCCACGACAGATTCTCTGATTTGGGGAGAGGCTGAAATCAGAGGCCAAGACATTGATGTGGGCCGCATCAACCCCAACGGAATCACTGGTTATGGTTGA 924 0.4892 MFSALIQPHEPIVPQEEIQGSNHRGDPCLVLTSDPKPRLRWTAELHERFVDAVTQLGGADKATPKSIMRTMGVKGLTLFHLKSHLQKYRLGKQSGKDLTEGPKDGTSASYLLDSPGTGTSSPSLPTSDMNEGYEVKEALRAQMEVQRQLHLQVEVEKHVQIRKDAEQRYFESMLEKACKMLDDQTLGAAVTECHDLSGLAMKLSARISLNDPLSFYSLCPAGAVRVHIPEDEHRGLQPQRADCSNESCLTSHGSPATLSLETSPAGGTKRVRNLDSTTDSLIWGEAEIRGQDIDVGRINPNGITGYG* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00087 307 MobiDBLite consensus disorder prediction 110 128 - -
Eupl06g00087 307 Pfam Myb-like DNA-binding domain 39 89 IPR001005 -
Eupl06g00087 307 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 15 257 IPR044848 GO:0003700
Eupl06g00087 307 MobiDBLite consensus disorder prediction 252 272 - -
Eupl06g00087 307 Gene3D - 35 93 - -
Eupl06g00087 307 Pfam MYB-CC type transfactor, LHEQLE motif 134 180 IPR025756 -
Eupl06g00087 307 FunFam Myb family transcription factor 35 93 - -
Eupl06g00087 307 SUPERFAMILY Homeodomain-like 36 92 IPR009057 -
Eupl06g00087 307 MobiDBLite consensus disorder prediction 92 128 - -
Eupl06g00087 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 93 IPR017930 -
Eupl06g00087 307 NCBIfam myb-like DNA-binding domain, SHAQKYF class 36 91 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00087 Eupl-Chr6 1624887 1632766 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00087 18 254 G2-like Transcription Factor Family AT3G24120 51.807 2.62e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl06g00087 Myb_DNA-binding 1.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00087 - - nnu:104594360 447.203