Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00086 ATGTATCAACCGAAGACTGCCCCCAGTTCAAGTTCAGTTCGCAGCAACTCGTTACTTCATGGCCAGCACTTAGAAAGTGGTGCTAACACAATGAGTCCCAGCAGCGGAGGCAATAGTCTCAATAACAACTCTACTATGGCCTCGAGGCAACGATTGCGCTGGACAAATGAGCTCCATGAACGGTTTGTGGATGCTGTAGCGCAACTCGGTGGGCCAGATAGGGCAACTCCTAAAGGTGTACTTAGAGTTATGGGTGTTCAAAGTTTGACCATATATCATGTCAAAAGCCACTTACAGAAATATCGGCTTTCAAAATTCCTTCCTGAATCTGAATTTGATGGAAAAAAGGCTGACAAAAAAGAATCGGGGGACTTGCTTTCCAGCTCAGATGGTTCATCTGGGATGCAAATAACGGAAGCACTCAAGCTGCAGATGGAGGTGCAAAAGCGGCTGCATGAACAGTTGGAGGTCCAGAAGCAGCTACAGTTACGAATAGAAGCCCAAGGAAAGTACCTTAAGAAGATCATTGAAGAGCAACAACGGCTCAGCGGTGTTTTTGAAGCACCCAGTTCAGGGATCCCTGCCCCCACTTCAGGTGACAACTGCTCAGAATCCGATAACAAGACTGACCCATCAACTCCTGCTCCAACCTCAGAGACCCCTCTCCAAGACAAGGCTGCCAAGGAGCGTGCCCCAGCCAAGAGTCTCTCCATTGACGAATCTTTCTCATCCCGCCACGAGCCACTGACTCCGGATTCTGGCTGCCATGTTGGTTCCCCAGCCGACAGTCCAAAAGGCAAAAGGCCAGACAAAAAGCAGCGGCTGAACATGGGTGCCACACATGCAAAACCAGAAATGGTGCTTACACACCAAATACTGGAGTCAAGCTCAGGCTCAGGTTTCCAGCAGCCATGCGCAGTTTTCTCACTCGAGCATTTCAATCTCTCATCGGGGACTTCCCTCAGCGATGAAGATCAGTGTGAAAATGCTTCCTGA 996 0.494 MYQPKTAPSSSSVRSNSLLHGQHLESGANTMSPSSGGNSLNNNSTMASRQRLRWTNELHERFVDAVAQLGGPDRATPKGVLRVMGVQSLTIYHVKSHLQKYRLSKFLPESEFDGKKADKKESGDLLSSSDGSSGMQITEALKLQMEVQKRLHEQLEVQKQLQLRIEAQGKYLKKIIEEQQRLSGVFEAPSSGIPAPTSGDNCSESDNKTDPSTPAPTSETPLQDKAAKERAPAKSLSIDESFSSRHEPLTPDSGCHVGSPADSPKGKRPDKKQRLNMGATHAKPEMVLTHQILESSSGSGFQQPCAVFSLEHFNLSSGTSLSDEDQCENAS* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00086 331 MobiDBLite consensus disorder prediction 114 133 - -
Eupl06g00086 331 SUPERFAMILY Homeodomain-like 48 103 IPR009057 -
Eupl06g00086 331 Gene3D - 48 107 - -
Eupl06g00086 331 MobiDBLite consensus disorder prediction 194 220 - -
Eupl06g00086 331 Pfam MYB-CC type transfactor, LHEQLE motif 135 181 IPR025756 -
Eupl06g00086 331 MobiDBLite consensus disorder prediction 263 278 - -
Eupl06g00086 331 MobiDBLite consensus disorder prediction 24 49 - -
Eupl06g00086 331 FunFam Myb family transcription factor 48 106 - -
Eupl06g00086 331 NCBIfam myb-like DNA-binding domain, SHAQKYF class 50 104 IPR006447 GO:0003677
Eupl06g00086 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 106 IPR017930 -
Eupl06g00086 331 MobiDBLite consensus disorder prediction 186 283 - -
Eupl06g00086 331 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
Eupl06g00086 331 Coils Coil 138 158 - -
Eupl06g00086 331 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 39 313 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00086 Eupl-Chr6 1614221 1621767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00086 84 331 G2-like Transcription Factor Family AT2G01060 62.903 1.15e-98 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl06g00086 Myb_DNA-binding 3.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00086 - - vvi:100248144 478.789