Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl06g00070 | ATGGGTGATCAAGAAAACCAGTCTGGGTTTCTTGAAAGTAACGTACGACCCCTCTTGCAAGAAGAAGAAGAAGAAACGGTAGCACATGAGAGATCGGTTTCTTTGGATGGAGAGCCGACGATGAAAGGGATACTAAGAATCACGCTCAAGGTTGGAAAGGCTCGTGAATGCAGCATGGGAGGAGGAGAAGGCCGTGTAGAATACAACCAGAGAACTGAAAAAGAAAACAGAGTCTGCAAGGTCTGTAACAAGATTTTCAGCTCAGGAAGAGCTCTGGGAGGTCATATGAGAGTTCATTCTCAGTTGGGAGATGGCGATGTTTCGAAAAAGAATCAAAATCCGAAGCTCAAGATGGATCACCAGGAGCTCAAGAATCACCTCCGCAATCTTTCGGCTCACATTGCGACTGATGAATCCATTGAAGACAATCCAAAGACTAACAGTAACGCTACTTGTTCGCTGTGTAGAAAGATCTTCCCGTCGATGAAGTCGTTGTTCGGTCATATGAGATGCCATCCTGAAAGACAATGGAGGGGAATTCAACCTCCCCAGAATCAGATGGCCAAGAACAGCTCTTCCTCGACCGTTTCAGATTCCAAAGACAATCGGAAGATGGATGATCATCAGATTGATTCTGCAACAACGACGGCTGGGAGTGGGAGCTCATCTTTGGATCTAGTACAATCTCTTTCTAGCTGGTCAGTTACTGCCAAGAGAGGCCGGAAAAGTATTGCGTCTGTTAATTCAGAGGAACGGTTACCTGATGCGGTCTTTGATCTCATGATGCTAGCTCAAGGAGATTCTCTGGATTCTGCCTTGTCCAACAAGCGAAGAAGCGAAGAATCAGATGGTACGCACAAGGATTTCTCATCAAAGAATGCCAAAATTGAGGACCGTGTTCATGTTTTGGGAAATTTTGATCAGTCAAAGAAGCAAAGAAGCGAGGAGTCAGAAGCAGGAAACATGGATCTTTTGTCTAAGAAGCTGAAAATTGATGGAGGAGAGAGATACATGGGTGTTTCTCGAACTGGGTTTGATCCAGAATCGATGAACATGGACTCTGAATGCAAGTTTTCAGATAGATTTGGAGAAAATTCAGAGCAAAAGAGTGAGGAGGAACCAGAGAGCAAGTACACACATTACAACAAGAACAAGAAGAACAAAAAGAAGAAAATTAAGTTCAGAGATTTAGAAACAGTTGGTGACATGGGTGCGATAGATTACAAGCAGACACCCACAAGAATCACTGAAAGATATAAGTGCACCACTTGCAACAAGTCCTTCCCTTCTCATCAAGCACTGGGTGGTCACAGATCCAGTCATAAAAAAGTGAAGAACAGTTTCCAGGCTACAGATATGGAAGAATTTGCATTAGCAAATGCTTCATCAGAGGAGGAACAATATGGGATTGCCACCAATCTGACCCAATTACCGGAATTCGATGACACCGGATCAAAGATGGTGACAACACATCGTTGCAATATTTGCAACAAGACATTTGCTACAGGTCAGGCTCTGGGGGGCCACAAAAGGTGTCATTTTAATGGCCCAGTTGAAGCTCCTCCTAGCTCAGTGGCGTCGTCACCGGAGAAAGTCAGTAAGACAGTTCGGAAGTTGTTTGATTTCGACCTCAATGAGCTGCCGGCTATGGAAGATGACAACGAAGATTGTCTCCAGTCTGCTTCTACTCAGTCCATAGGCAATAAACATGGACTTGATTATGATGCATCTTCCTCTTACAATTCAGTTAATTAG | 1755 | 0.441 | MGDQENQSGFLESNVRPLLQEEEEETVAHERSVSLDGEPTMKGILRITLKVGKARECSMGGGEGRVEYNQRTEKENRVCKVCNKIFSSGRALGGHMRVHSQLGDGDVSKKNQNPKLKMDHQELKNHLRNLSAHIATDESIEDNPKTNSNATCSLCRKIFPSMKSLFGHMRCHPERQWRGIQPPQNQMAKNSSSSTVSDSKDNRKMDDHQIDSATTTAGSGSSSLDLVQSLSSWSVTAKRGRKSIASVNSEERLPDAVFDLMMLAQGDSLDSALSNKRRSEESDGTHKDFSSKNAKIEDRVHVLGNFDQSKKQRSEESEAGNMDLLSKKLKIDGGERYMGVSRTGFDPESMNMDSECKFSDRFGENSEQKSEEEPESKYTHYNKNKKNKKKKIKFRDLETVGDMGAIDYKQTPTRITERYKCTTCNKSFPSHQALGGHRSSHKKVKNSFQATDMEEFALANASSEEEQYGIATNLTQLPEFDDTGSKMVTTHRCNICNKTFATGQALGGHKRCHFNGPVEAPPSSVASSPEKVSKTVRKLFDFDLNELPAMEDDNEDCLQSASTQSIGNKHGLDYDASSSYNSVN* | 585 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl06g00070 | 584 | Gene3D | Classic Zinc Finger | 416 | 513 | - | - | |
Eupl06g00070 | 584 | PANTHER | C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED | 70 | 204 | IPR044653 | GO:0003700 | |
Eupl06g00070 | 584 | MobiDBLite | consensus disorder prediction | 341 | 385 | - | - | |
Eupl06g00070 | 584 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 493 | 513 | IPR013087 | - | |
Eupl06g00070 | 584 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 79 | 99 | IPR013087 | - | |
Eupl06g00070 | 584 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Eupl06g00070 | 584 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 77 | 100 | IPR013087 | - | |
Eupl06g00070 | 584 | MobiDBLite | consensus disorder prediction | 556 | 584 | - | - | |
Eupl06g00070 | 584 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 421 | 441 | IPR013087 | - | |
Eupl06g00070 | 584 | MobiDBLite | consensus disorder prediction | 353 | 381 | - | - | |
Eupl06g00070 | 584 | MobiDBLite | consensus disorder prediction | 179 | 198 | - | - | |
Eupl06g00070 | 584 | SMART | c2h2final6 | 491 | 513 | IPR013087 | - | |
Eupl06g00070 | 584 | SMART | c2h2final6 | 77 | 99 | IPR013087 | - | |
Eupl06g00070 | 584 | SMART | c2h2final6 | 419 | 441 | IPR013087 | - | |
Eupl06g00070 | 584 | SMART | c2h2final6 | 150 | 172 | IPR013087 | - | |
Eupl06g00070 | 584 | MobiDBLite | consensus disorder prediction | 551 | 584 | - | - | |
Eupl06g00070 | 584 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 150 | 177 | IPR013087 | - | |
Eupl06g00070 | 584 | MobiDBLite | consensus disorder prediction | 17 | 33 | - | - | |
Eupl06g00070 | 584 | SUPERFAMILY | beta-beta-alpha zinc fingers | 418 | 513 | IPR036236 | - | |
Eupl06g00070 | 584 | MobiDBLite | consensus disorder prediction | 273 | 294 | - | - | |
Eupl06g00070 | 584 | Pfam | C2H2-type zinc finger | 78 | 100 | - | - | |
Eupl06g00070 | 584 | Pfam | C2H2-type zinc finger | 418 | 443 | - | - | |
Eupl06g00070 | 584 | Pfam | C2H2-type zinc finger | 491 | 513 | - | - | |
Eupl06g00070 | 584 | Pfam | C2H2-type zinc finger | 152 | 174 | - | - | |
Eupl06g00070 | 584 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 419 | 446 | IPR013087 | - | |
Eupl06g00070 | 584 | MobiDBLite | consensus disorder prediction | 271 | 294 | - | - | |
Eupl06g00070 | 584 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 491 | 513 | IPR013087 | - | |
Eupl06g00070 | 584 | MobiDBLite | consensus disorder prediction | 178 | 206 | - | - | |
Eupl06g00070 | 584 | Gene3D | Classic Zinc Finger | 55 | 176 | - | - | |
Eupl06g00070 | 584 | SUPERFAMILY | beta-beta-alpha zinc fingers | 78 | 172 | IPR036236 | - | |
Eupl06g00070 | 584 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 152 | 172 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl06g00070 | Eupl-Chr6 | 1457377 | 1459663 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl06g00070 | 416 | 556 | C2H2 Transcription Factor Family | AT5G04340 | 36.301 | 1.79e-19 | 86.3 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Eupl06g00070 | zf-C2H2_6 | 1.7e-10 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl06g00070 | - | - | nnu:104594341 | 377.096 |