Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00060 ATGGCTGGGATTGATGGCCATGTTGCTGTAATTGGGGATTGGGCACCACCAAGTCTCAGCCCGAGGACCTTTTTCTCATCCATCTTGGGTGAAGATTCTGGTTCAACATCGTTCTCAAACCTTATAGGAGATAATGGGAGTGAAGGGCCTTTCACACTATCTGAAAAGGTGGAACTAACAATGAATTCCGAGGAAGAAGATGGTGACCATTTATCAACGCCAAGCGTACTTTACAGCGGGAAATCATGCTCGCACGGGGGTCTTGCAGAGAGGATGGCAGCAAGAGATGGCTTTAACGCTCCAAGGTTGAACACAGCAAGGATAAGATCTACTAACCTGTCCTCTTCCCCTGAAGTTCGGTCTTCTTACCTGACGATTCCACCAGGTCTCAGTCCAACGACATTGCTGGATTCTCCGGTTTTCCTTTCAAATTCTCAGGTAACTCCTGCCACCACTGCTCAGCAGCCCTTTACCAGTATTGAGGTGTCAGTTCAGTCGGATCACTCTCTTCGACCGCAAAGTCTAGAAGCCGCTGAAGTTCAATCCCAGAATCGAAACAGTTTCCATCCTCAGGCAAACTTCCCCAAATCATCCATTCAAAAAGGTAGAGGTGGTAATAAAATCACGTCTGATCCAAGGGTGTCCAATCCTGTCATTGCCAACACCAAACATTCTCCACCGCTTGATGATCAACAGGATGGGGAGGGAAATCAGAGAAGCAATGGAGAATTAAATTCCATGGTTGTTGGTGGCGCCCCATCAGAGGATGGATACAATTGGAGGAAGTATGGGCAGAAACAGGTGAAGGGTAGTGAGTGCCCTCGAAGTTATTACAAGTGCACATATCCAAATTGTCAGGTGAAGAAGGTGGAGAGATCTCATGAGGGCCACGTTACAGAGATCATCTACAAGGGGGCCCACAATCACCCCAAACCTCCACCTAACCGTCAATTGGCTGTTGGATCCTCTAACCCACGAAGTGACATGCAACTTGACATCCCTGAACATGCCGGGGCACATGCTGGGGCTGATGGTGATACCGAATGGGCAAGGTCACAGCAGGCAACCGCTGCCGGAGTTCAGGATTGGAGGCACGACAACCTGGAGGCATTGTCGTCCAAATTCTGTGACCCATCTTCCTCCATGCAGACTCAAAATGGCCCTTACTTTGAAACCAACGATGCTGTTTTGGCTGTCTCCTCCACCCTGTCTAATGATGTAGATGAGGATGATCAGGGGACACATGGCAGTGTGTCATTGGGTTACGATGGTGAAGGAGATGAATCTGAGTCAAAGAGAAGGAAGATTGATGCTTGTGCAATGGAAATGGGTGGGGCTGCAAGAGCCATTCGTGAACCAAGAGTGGTGGTCCAAACAACCAGTGAGGTGGACATACTTGATGACGGGTACCGCTGGCGCAAGTACGGGCAGAAAGTTGTCAAAGGAAATCCAAATCCAAGGAGCTACTACAAGTGCACTAATGCAGGCTGCACAGTTAGGAAGCATGTAGAAAGGGCATCACACGACCTTAAATCAGTGATCACTACGTATGAGGGGAAGCATAATCACAATGTTCCTGCTGCAAGGAATAGCAGCCATGTCAGCTCCGGCCCCTCCATCACAGAATCTGCCCCAACTGCTCAAATCCATATCCACAGGCCTGAGACATCCCAAGTTCATGAAAGCATGGCAAGGTTTGATGGACCTGCGTCACTTGGAATATACGGTCTGCCTGGCAGGCAGCAGCTGGGACCCTCATCCGGCTTTTCTTTTGGAATGAGTCGGCCAGGCCTGGCCAAGTTAAGTTGCCTGTTCATCCGTTTTTAG 1827 0.4932 MAGIDGHVAVIGDWAPPSLSPRTFFSSILGEDSGSTSFSNLIGDNGSEGPFTLSEKVELTMNSEEEDGDHLSTPSVLYSGKSCSHGGLAERMAARDGFNAPRLNTARIRSTNLSSSPEVRSSYLTIPPGLSPTTLLDSPVFLSNSQVTPATTAQQPFTSIEVSVQSDHSLRPQSLEAAEVQSQNRNSFHPQANFPKSSIQKGRGGNKITSDPRVSNPVIANTKHSPPLDDQQDGEGNQRSNGELNSMVVGGAPSEDGYNWRKYGQKQVKGSECPRSYYKCTYPNCQVKKVERSHEGHVTEIIYKGAHNHPKPPPNRQLAVGSSNPRSDMQLDIPEHAGAHAGADGDTEWARSQQATAAGVQDWRHDNLEALSSKFCDPSSSMQTQNGPYFETNDAVLAVSSTLSNDVDEDDQGTHGSVSLGYDGEGDESESKRRKIDACAMEMGGAARAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHNVPAARNSSHVSSGPSITESAPTAQIHIHRPETSQVHESMARFDGPASLGIYGLPGRQQLGPSSGFSFGMSRPGLAKLSCLFIRF* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00060 608 ProSiteProfiles WRKY domain profile. 461 526 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00060 608 SUPERFAMILY WRKY DNA-binding domain 252 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl06g00060 608 ProSiteProfiles WRKY domain profile. 255 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00060 608 MobiDBLite consensus disorder prediction 163 247 - -
Eupl06g00060 608 MobiDBLite consensus disorder prediction 405 432 - -
Eupl06g00060 608 FunFam WRKY transcription factor 33 453 519 - -
Eupl06g00060 608 MobiDBLite consensus disorder prediction 163 259 - -
Eupl06g00060 608 MobiDBLite consensus disorder prediction 522 541 - -
Eupl06g00060 608 SUPERFAMILY WRKY DNA-binding domain 458 526 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl06g00060 608 Pfam WRKY DNA -binding domain 255 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00060 608 Pfam WRKY DNA -binding domain 467 523 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00060 608 FunFam WRKY transcription factor 244 313 - -
Eupl06g00060 608 SMART WRKY_cls 254 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00060 608 SMART WRKY_cls 466 525 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00060 608 Gene3D WRKY domain 246 313 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl06g00060 608 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 136 550 IPR044810 GO:0003700
Eupl06g00060 608 MobiDBLite consensus disorder prediction 305 360 - -
Eupl06g00060 608 MobiDBLite consensus disorder prediction 525 541 - -
Eupl06g00060 608 Gene3D WRKY domain 453 519 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00060 Eupl-Chr6 1373954 1378088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00060 1 602 WRKY Transcription Factor Family AT5G56270 46.434 4.28e-148 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl06g00060 WRKY 3.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00060 K18835 - fve:101313293 738.413