Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00055 ATGCTCAGCTCATTCAGTGGTTCTCATGACGAAGAAGATGACCCATCAGACTACCACCATCACCCCTACCAGAATCCTGCCCCACCACGCGGGTTCACCTCCCCGGCGACCCACAAGCGCCAATTACTGATCAGCTGCGCCGGGCTCATCTCTCGGTCCGACTTCACTGCTGCCCACCGCCTCGTCTCGCTCCTCTCCACCAGCTCTACGCCTTATCGTGACTCCACTGACAGGTTGATCCACCAATTTTCCAGAGCTCTCTCCTTCAGGCTCAATCGCTACACCTTCCGCAACTTCGTCTCTTCTGCCGCCTCCACCAGTGCCATGATCCCTTCTGCTGCTGCTCATCCCATCGTAACCGGTGGCGGGGCCTCCGAACTCCATAGTCTTCAGTCCACTTATCTCTCCCTCAATCAAGTCACCCCATTCATAAGGTTTAGCCACCTCACCGCCAACCAAGCCATCTTAGAAGCCATTGAAGGCCAACAGTCAATCCACATCCTCGACTTCGACACCATGCACGGGGTGCAATGGCCCCCTCTGATGCAGGCCATCGTTGGGCGTTCGGACCCATCAAACCTCCCGATGATCCGAATCACAGGAACAGGCCAGGACTTGGACACCCTTCTAAGAACCGGCGAGCGCCTTCAGAAATTCGCCGAGTCTCTGGGCCTTAAATTCCAATTCCATCCGCTTCTCCTCCTCAACGATCCTTCTTCTGTGACTCTCCACCTCCCCTCCGCCATTGCACTCCTTCCCGGTGAGACTCTTGCCGTAAATTGTGTGCTTTTTCTGCACAGGCTCCTCAGAGACGATTCTCGTGAAGTCCGGCTCTTCCTCCGCACCATCAAGGCCATGAATCCCAAGGTTGTGACCGTCGCCGAGAGAGAAGCTAACCACAATCACCCAATGTTCTTTCAGAGGTTCGTGGAAGCCTTGGACCATTACACTGCCTTGTTCGACTCCCTCGAAGCGACGCTTCCGCCCAACAGCAGGGAAAGGCTCGCCGTTGAAGAGGTCTGGTTTGGTAGGGAGATTGTTGACATCGTGTCTGCGGAGGGAGACGAGAGGAGAGAACGGCACGAGAGGTTGGAGAGTTGGGTGGAGAAGTTGACAAGCTCAGGCTTTTCGAACGTTCCGCTGAGCCCCTTCGCCTTGTCGCAGGCCAAGCTCCTACTCAGGCTCCATTATCCCTCTGAAGGATATCAACTGCATACTCTCAACGACTCCTTCTTCCTAGGTTGGCAAAATCAAGCCCTCTTCTCAGTCTCTTCGTGGCACTAG 1284 0.553 MLSSFSGSHDEEDDPSDYHHHPYQNPAPPRGFTSPATHKRQLLISCAGLISRSDFTAAHRLVSLLSTSSTPYRDSTDRLIHQFSRALSFRLNRYTFRNFVSSAASTSAMIPSAAAHPIVTGGGASELHSLQSTYLSLNQVTPFIRFSHLTANQAILEAIEGQQSIHILDFDTMHGVQWPPLMQAIVGRSDPSNLPMIRITGTGQDLDTLLRTGERLQKFAESLGLKFQFHPLLLLNDPSSVTLHLPSAIALLPGETLAVNCVLFLHRLLRDDSREVRLFLRTIKAMNPKVVTVAEREANHNHPMFFQRFVEALDHYTALFDSLEATLPPNSRERLAVEEVWFGREIVDIVSAEGDERRERHERLESWVEKLTSSGFSNVPLSPFALSQAKLLLRLHYPSEGYQLHTLNDSFFLGWQNQALFSVSSWH* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00055 427 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 40 423 IPR005202 -
Eupl06g00055 427 ProSiteProfiles GRAS family profile. 30 427 IPR005202 -
Eupl06g00055 427 MobiDBLite consensus disorder prediction 1 35 - -
Eupl06g00055 427 Pfam GRAS domain family 40 426 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00055 Eupl-Chr6 1337522 1338805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00055 38 426 GRAS Transcription Factor Family AT1G55580 51.111 2.98e-132 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl06g00055 GRAS 3.1e-120 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00055 - - nnu:104594324 648.277