Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00052 ATGGCGTCAGCTGTAGGTTCGAGCGCTTGTACGGAACTGCCTCAAGGAGCCTCACAAATTCGAAGCTCTAAATCGCGAGAAGATACGTATTCTCAATATTCTCACCCTGCCCTCGTCCATCTCAACAGGCCTCAATATTCTCAGAGAAACCTCTTTCCTCTCTTGCCTTCGCTTCCTCCTCCTCCACTGGGTTGCCTTTTGTTGCAGTCATGGGGTGAAGTTGAACTCGTCGTCTTTGGAGCTTACACCAACGATCTTGTTGATGATGAAATCTCGAAGATCTTCCTCTGCCAGCCTTCCTTGCTCAAAGTCGACCTTACTATTCTTGAGCCCAAGCTCCGTGGGTTGGGTCTCACTAGTTCCGACCTCGTCAAGATCAACTGCTGGCCCCGCTTCTTGGCCTGTCGCATTGGACGGGGCCTTGACGAGCGCATCAACTTCCTGCAGACCCTTTTTGGGTCCAAGGAAATGCTTATCAAGGCGATCATCCGGAACCCCTCTCTCCTCAACTACGACTTACAAAATGGTATCAAACCTTGCATCGCCCTCTACGAAGGAATGGGCATAAGCAAAGAGGAGTTGGTGCCTATGCTCATTTCTCGGCCCACCTTAGTTCCCCGATCCTCACTCAACCAGGACAAGGTCGATTACATCTGCAGGACCGGTCTCTCCAAGGATTCCAAGATGTACAAGTATGTTGTCTCCCTCATTGCAATATCCCGCCTCGAGACTATCTGCAAAAAGGTGGCCAACCTAGAGAAGTTTGGGTTCTCAGGTGACAAGGTGATGGGTCTTTTCGGCCGCTCTCCACTAGTGCTCACACTCTCCATCGACAAGGTCCAGAGGAACATGACTTTCATTATAGGGACCGTGAAGCTCCCCGCTTCTGTTATCCTTCGTTACCCATTTTTCTTGTACTTTAACTTGGAGACTGTGTTGAAGCCGCGATTTCTTCTCACAAAAAGGATACGGGCAATGTGTCTGCTTCCACAAATTAAAGGACCAGCCATGTTGAGGGCATTCAGGAGAACAGAGCCTCGGTTCCTCAAGGCATTTGTTACGTCACTCCAAGGAACTGATGGAGTTCTACGAAAAGATTAA 1101 0.495 MASAVGSSACTELPQGASQIRSSKSREDTYSQYSHPALVHLNRPQYSQRNLFPLLPSLPPPPLGCLLLQSWGEVELVVFGAYTNDLVDDEISKIFLCQPSLLKVDLTILEPKLRGLGLTSSDLVKINCWPRFLACRIGRGLDERINFLQTLFGSKEMLIKAIIRNPSLLNYDLQNGIKPCIALYEGMGISKEELVPMLISRPTLVPRSSLNQDKVDYICRTGLSKDSKMYKYVVSLIAISRLETICKKVANLEKFGFSGDKVMGLFGRSPLVLTLSIDKVQRNMTFIIGTVKLPASVILRYPFFLYFNLETVLKPRFLLTKRIRAMCLLPQIKGPAMLRAFRRTEPRFLKAFVTSLQGTDGVLRKD* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00052 366 PANTHER CGI-12 PROTEIN-RELATED 79 354 IPR003690 GO:0003690|GO:0006355
Eupl06g00052 366 SMART mt_12 159 190 IPR003690 GO:0003690|GO:0006355
Eupl06g00052 366 SMART mt_12 263 294 IPR003690 GO:0003690|GO:0006355
Eupl06g00052 366 SMART mt_12 123 155 IPR003690 GO:0003690|GO:0006355
Eupl06g00052 366 SMART mt_12 295 326 IPR003690 GO:0003690|GO:0006355
Eupl06g00052 366 SMART mt_12 227 258 IPR003690 GO:0003690|GO:0006355
Eupl06g00052 366 Pfam mTERF 124 333 IPR003690 GO:0003690|GO:0006355
Eupl06g00052 366 Gene3D Transcription termination factor 3, mitochondrial 127 357 IPR038538 -
Eupl06g00052 366 FunFam Mitochondrial transcription termination factor family protein 141 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00052 Eupl-Chr6 1261305 1271842 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Eupl06g00052 mTERF 5.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00052 K15031 - nnu:104597637 352.829