Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00023 ATGGCTTCTCATTTGGCAACCATGGTCTGCAACCTTTTGTTCTCCTCACTGATCTTGATCTCCATAGCCGTGGTCCCTACATCCGCTTATCAGTTTCAAATCGGTGGTCCAAGAGGTTGGATTAAACCCACCAAAAATGACACCAAGGTCTACGATGAGTGGGCGACCAGGAACAGATTTCATATTGGAGATTACATATATTTCAAGTACGAGAATGACTCGGTGCTAGTAGTGAACCGCTCCGACTACATAAACTGCAATGTGTCGAACCCGGTCTCCAAATTCAGAGATGGAAACACTGTTTTCCAATTTGATCGTTACGGCTTCTTCTACTTCACTAGTGGGGAGCCTGAGCATTGTGAATCCGGCCAGAGATTGGTCATCCGGGTAATGGTGCACCCCGGTGTTGAGCCCCCAGAATCTGCTCCTCCTCCATCAGCAAGTGGCGGGTCAGGAAGTGGGGGAGGCTCGGGTTCTGGTGGATTGGGACCACCAACACAAAATTCGACTACTATACTGTCTGTTGGATCTTATTTCATGACTGCCCTTGTGGCCATGGTGATCATTCTTTATTTGTTTATGTAG 585 0.4769 MASHLATMVCNLLFSSLILISIAVVPTSAYQFQIGGPRGWIKPTKNDTKVYDEWATRNRFHIGDYIYFKYENDSVLVVNRSDYINCNVSNPVSKFRDGNTVFQFDRYGFFYFTSGEPEHCESGQRLVIRVMVHPGVEPPESAPPPSASGGSGSGGGSGSGGLGPPTQNSTTILSVGSYFMTALVAMVIILYLFM* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00023 194 MobiDBLite consensus disorder prediction 146 165 - -
Eupl06g00023 194 Pfam Plastocyanin-like domain 45 124 IPR003245 GO:0009055
Eupl06g00023 194 MobiDBLite consensus disorder prediction 137 165 - -
Eupl06g00023 194 PANTHER BLUE COPPER PROTEIN 29 151 IPR039391 GO:0009055
Eupl06g00023 194 SUPERFAMILY Cupredoxins 29 131 IPR008972 -
Eupl06g00023 194 ProSiteProfiles Phytocyanin domain profile. 30 132 IPR003245 GO:0009055
Eupl06g00023 194 FunFam Early nodulin-like protein 1 29 135 - -
Eupl06g00023 194 Gene3D - 28 134 IPR008972 -
Eupl06g00023 194 CDD OsENODL1_like 30 131 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00023 Eupl-Chr6 837895 838665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00023 10 144 Phytocyanin Superfamily AT1G79800 42.857 2.02e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00023 - - nnu:104605168 219.55