Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00022 ATGGGGGAGACTATTGGGCTGGTAAAAGTGATTGTACTGCAAGGGAAAAAGCTGGTAGTTCGGGATTTCAGGACGAGCGATCCTTATGTCGTGGTCAAGCTGGGTAATCAGACTGCAAAGACCAAGGTTATTAACAGTTGCCTTAATCCCGTTTGGAATGAAGAGTTAACCTTCTCCGTTACGGAACCTGTTGGAGTTCTAAACTTGGAGGTGTTCGACAAAGATCTTATCAAAACAGATGATAAGATGGGATATGCACACCTTAGCCTTCAACAGATCGCATTGGCAGCAAGGATAAAACGTGTCCTGCAGGCTTCGGCAGGGGACACAAGGATAAGAACAGTGGTTCCAGATAGTGATAACTGCCTTGTTAGGGAGAGCCGTGTAAGTTGTGTAGCTGGTGAGGTTGTGCAGGATGCTTGGTTGAGACTTAGTGGGGTGGAGTCGGGGGAGATTGAGTTGAAGCTCAAATGGGTTGATCATCCTTCTCTTGCTTCTGCTGCTCCCTCAAAGTAG 516 0.4709 MGETIGLVKVIVLQGKKLVVRDFRTSDPYVVVKLGNQTAKTKVINSCLNPVWNEELTFSVTEPVGVLNLEVFDKDLIKTDDKMGYAHLSLQQIALAARIKRVLQASAGDTRIRTVVPDSDNCLVRESRVSCVAGEVVQDAWLRLSGVESGEIELKLKWVDHPSLASAAPSK* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00022 171 CDD C2_ArfGAP 5 150 - -
Eupl06g00022 171 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Eupl06g00022 171 PRINTS C2 domain signature 46 59 IPR000008 -
Eupl06g00022 171 PRINTS C2 domain signature 22 34 IPR000008 -
Eupl06g00022 171 PRINTS C2 domain signature 67 75 IPR000008 -
Eupl06g00022 171 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 5 162 IPR044562 -
Eupl06g00022 171 Gene3D C2 domain 3 165 IPR035892 -
Eupl06g00022 171 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 160 IPR035892 -
Eupl06g00022 171 SMART C2_3c 7 102 IPR000008 -
Eupl06g00022 171 Pfam C2 domain 7 99 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00022 Eupl-Chr6 780812 786941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00022 1 159 C2H2 Transcription Factor Family AT4G05330 42.138 3.90e-36 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00022 - - ming:122093767 261.151