Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02400 ATGGACCACCCAAAGCTCAATTCCATCTACTTTCCTTCCCTGCCTCTCCTCTTTGTTGTACTGTTTCTTCTTCCTCCAGTCATTGCTGACCTGAATTCTGACAAACAAGCCCTCCTTGACTTTGCTGCTGCAGTACCGCATGGCAGAAAGCTCAACTGGAATCCTGCTACCCCCATCTGCTCTGCCTGGGTTGGCATCACTTGCACCCAAGATAACACCCGCGTGTATGCCCTCCGACTCCCTGGCGTTGGACTATTTGGCCCAATTCCCACAAACACTCTTGGAAAACTTGATGCCCTCCACATTCTCAGCCTCCGATCCAACCGCCTCAGTGGAAGTCTTCCTTCTGACATCTCGTCCCTTCCATCCCTTCATAACCTCTACCTCCAACATAACAACTTCTCTGGCAGTGTCCCTTCCTCTCTCTCCTCTGAACTAAACATAATCGATCTCTCCTTCAACTCCTTCACGGGAAACATTCCACCTATGATTCAAAATCTGACACAACTCACTGGATTGAGCCTCCAGAACAACTCACTCACTGGACCCATCCCTGATCTCAACCTCCCAGGGCTCAAGCGTTTGAACCTGAGCTACAACCACCTTAACGGGTCAATCCCATTTTCCCTCCAAAAGTTCCCCAATTCTTCCTTTGTGGGAAACTCTTTCTTATGTGGACCACCTTTGAGTCGATGCTTTCCAATCCCCCCTTCACCTTCCCCTTCCCCTCCTTCCTTGCCACCCCCACCCCCTCAAAAACAGAAGGAGCGTTCTACCAAGAAACTTGGAACTGGGGCTATCATTGCCATTGCAATTGGAGGCTCTGCATTGCTGTTTCTTCTAGCACTAGTGATCTTGGTATGTTTCTTGAAGAGAAAAGGTAGAGAAGGCAGTAGTGTGTTGAAAGGGAAGGGCTCTAGTGGTGGAAGGAGCGAGAAGCCTAAGGAGGAGTTTGGAAGTGGAGTGCAAGAGGCTGAGAAGAACAAGTTGGTTTTCTTTGAGGGCTGCTCTTATAACTTTGATCTTGAGGATCTATTGAGGGCTTCGGCCGAAGTGCTGGGGAAGGGGAGTTACGGGACAGCCTATAAGGCTGCCTTGGAGGAGGGAACAACTGTGGTGGTGAAGAGGTTGAAGGAAGTGGTAGTAGGGAAGAGGGAGTTTGAACAGCAGATGGAAATAGTAGGAAGGGTCGGACAGCACTCAAATGTTGTGCCCCTCCGCGCTTATTACTATTCCAAGGATGAGAAGCTTCTTGTTTATGACTACGTTCCAGCTGGCAGCTTGTCTACACTTTTGCATGGAAACAGGGGTCCTGGAAGAACTCCACTAGACTGGGACTCCAGGGTAAAAATCTCCCTTGGAACTGCAAGGGGCATCGCCCACATTCATTCCGAGGGTGGTGGGAAATTCACCCATGGCAACATAAAGTCCTCCAATGTCCTCCTGAACCAAGATCTCGACGGCTGCATCTCAGATTTTGGTCTGACCCCTCTCATGAATGTCCATGCCACTCCATCTCGAACCGCTGGGTACCGCGCTCCCGAGGTGATTGAAACGCGGAAACCAACTCAGAAATCTGACGTGTACAGCTTTGGTGTCCTCCTCCTTGAGATGCTGACAGCTAAAGCCCCGCTCCAATCACCAGGGCATGATGACATGGTCGATCTCCCAAGGTGGGTCCAGTCAGTTGTCAGAGAGGAATGGACTGCTGAGGTTTTCGATGTTGAGCTGATGAGGTACCAAAATATCGAAGAAGAGATGGTTCAGATGCTACAAATTGCCATGGCCTGTGTAGTGAAAGTCCCGGACATGCGACCTAAGATGGATGAAGTTGTTAGGATGATTGAGGAAATCCGGCAATCTGACTCGGAGAACCGGGCATCCTCTGAAGAGAACAAGTCTTAA 1905 0.4992 MDHPKLNSIYFPSLPLLFVVLFLLPPVIADLNSDKQALLDFAAAVPHGRKLNWNPATPICSAWVGITCTQDNTRVYALRLPGVGLFGPIPTNTLGKLDALHILSLRSNRLSGSLPSDISSLPSLHNLYLQHNNFSGSVPSSLSSELNIIDLSFNSFTGNIPPMIQNLTQLTGLSLQNNSLTGPIPDLNLPGLKRLNLSYNHLNGSIPFSLQKFPNSSFVGNSFLCGPPLSRCFPIPPSPSPSPPSLPPPPPQKQKERSTKKLGTGAIIAIAIGGSALLFLLALVILVCFLKRKGREGSSVLKGKGSSGGRSEKPKEEFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAALEEGTTVVVKRLKEVVVGKREFEQQMEIVGRVGQHSNVVPLRAYYYSKDEKLLVYDYVPAGSLSTLLHGNRGPGRTPLDWDSRVKISLGTARGIAHIHSEGGGKFTHGNIKSSNVLLNQDLDGCISDFGLTPLMNVHATPSRTAGYRAPEVIETRKPTQKSDVYSFGVLLLEMLTAKAPLQSPGHDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVVKVPDMRPKMDEVVRMIEEIRQSDSENRASSEENKS* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02400 634 PANTHER OS05G0588300 PROTEIN 17 629 - -
Eupl05g02400 634 MobiDBLite consensus disorder prediction 235 259 - -
Eupl05g02400 634 FunFam Leucine-rich repeat receptor-like protein kinase 144 232 - -
Eupl05g02400 634 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 423 629 - -
Eupl05g02400 634 MobiDBLite consensus disorder prediction 235 253 - -
Eupl05g02400 634 Gene3D Ribonuclease Inhibitor 188 233 IPR032675 -
Eupl05g02400 634 FunFam Leucine-rich repeat receptor-like protein kinase 33 143 - -
Eupl05g02400 634 Pfam Protein kinase domain 350 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g02400 634 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Eupl05g02400 634 Gene3D Phosphorylase Kinase; domain 1 315 422 - -
Eupl05g02400 634 Gene3D Transferase(Phosphotransferase) domain 1 423 634 - -
Eupl05g02400 634 ProSiteProfiles Protein kinase domain profile. 347 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g02400 634 FunFam pollen receptor-like kinase 1 315 422 - -
Eupl05g02400 634 SUPERFAMILY Protein kinase-like (PK-like) 351 616 IPR011009 -
Eupl05g02400 634 MobiDBLite consensus disorder prediction 297 321 - -
Eupl05g02400 634 SUPERFAMILY L domain-like 44 231 - -
Eupl05g02400 634 ProSitePatterns Protein kinases ATP-binding region signature. 353 384 IPR017441 GO:0005524
Eupl05g02400 634 Gene3D Ribonuclease Inhibitor 31 187 IPR032675 -
Eupl05g02400 634 CDD STKc_IRAK 353 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02400 Eupl-Chr5 51627665 51631424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02400 16 632 Receptor kinase-like Gene Family AT5G58300 70.275 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Eupl05g02400 Pkinase 5.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02400 - - nnu:104593739 932.169