Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02393 ATGGCAGAAGAAAATCCTGCTGTTGACGTTAAGGATGATGGGGCAGAACTTGCCCCATTTGATCCTACAAAGAAGAAGAAGAAGAAGAAGGCTGTAATTCAGGATCCTGCAGATGATTCTGTGGAGAAATTGGCTGAGAAAACTGAAAGCTTGTCAGATATGGCAGAAGAAAATCCTGCTGTTGACGTTAAGGATGATGGGGCAGAACTTGCCCCATTTGATCCTACAAAGAAGAAGAAGAAGAAGAAGGCTGTAATTCAGGATCCTGCAGATGATTCTGTGGAGAAATTGGCTGAGAAAACTGAAAGCTTGTCAGTTTCTGATGGGCTCGAAAATGCTTTTGCTGGTTTAAAGAAGAAGAAGAAGAAACCGGTAGAGACAGATTTTTTGAATGATGAGAATGGGGATGTTGGAGAAGATCTAGATGATCACGTGGGAGAGGATGAAGAAGGAGAAGGGATTGTCCTGCAAGCGCGGTATCCTTGGGAAGGAAGTGAACGAGATTATGTATATGAAGAGCTTCTAGGTAGGGTGTTCAACATCTTGCGCGAGAATAATCCGGAGCTTGCTGGAGATAGACGTAGGACAGTGATGAGGCCACCGCAAGTACTTCGTGAGGGCACCAAAAAGACAGTCTTTGCGAATTTTATGGATCTATGCAAGACGATGCATCGGCAGCCAGAGCACGTCATGACTTTCTTACTTGCTGAAATGGGAACAAGTGGATCGCTGGATGGACATCAAAGATTAGTTGTTAAAGGAAGATTTGCTCCCAAAAATTTTGAAGGGATTCTGCGAAGATATGTCAATGAATATGTCATATGCAATGGGTGCAAAAGTCCAGATACAATTCTTTCCAAGGAGAACCGTTTGTTCTTTCTCAGATGCGAGCAGGTAATCACCTACCATACCATACTCTGTCAATTGGTTATACACATGCTGAAATTATTTTATGGTGAAGGTAGCTCTGACTCGATCTTTTGA 984 0.4289 MAEENPAVDVKDDGAELAPFDPTKKKKKKKAVIQDPADDSVEKLAEKTESLSDMAEENPAVDVKDDGAELAPFDPTKKKKKKKAVIQDPADDSVEKLAEKTESLSVSDGLENAFAGLKKKKKKPVETDFLNDENGDVGEDLDDHVGEDEEGEGIVLQARYPWEGSERDYVYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFANFMDLCKTMHRQPEHVMTFLLAEMGTSGSLDGHQRLVVKGRFAPKNFEGILRRYVNEYVICNGCKSPDTILSKENRLFFLRCEQVITYHTILCQLVIHMLKLFYGEGSSDSIF* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02393 327 Gene3D - 166 305 - -
Eupl05g02393 327 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 169 275 IPR016189 GO:0003743|GO:0006413
Eupl05g02393 327 Pfam Domain found in IF2B/IF5 193 298 IPR002735 GO:0003743|GO:0006413
Eupl05g02393 327 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 272 298 IPR016190 GO:0003743|GO:0006413
Eupl05g02393 327 SMART eIF2Bneu4 193 310 IPR002735 GO:0003743|GO:0006413
Eupl05g02393 327 MobiDBLite consensus disorder prediction 1 96 - -
Eupl05g02393 327 FunFam Eukaryotic translation initiation factor 2 subunit 166 306 - -
Eupl05g02393 327 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 172 298 IPR045196 GO:0003743|GO:0006413
Eupl05g02393 327 MobiDBLite consensus disorder prediction 1 23 - -
Eupl05g02393 327 MobiDBLite consensus disorder prediction 31 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02393 Eupl-Chr5 51541995 51566334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02393 62 305 Eukaryotic Initiation Factors Gene Family AT5G20920 73.984 1.99e-127 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02393 K03238 - ming:122085628 418.698