Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02392 ATGGTTTCCTCTGAAATATCTGGTTTGACTGGGACCCGCATGTGCAAGTACTTCCCAAGCCAGTTGCTTCTGCCTATGGGACCCCCTGATGTTGTTCCATCAGATCACATCGAATTTGATTTTTCTGATGTATTCGGCCCTTCACCAAATCAAGCCTCAATTGAAGTGAGCTTAGGAAATTCCGTACTGGATGCGAATGAATTAGTTTTTGATGATCCGATGGTCATTTACAGCCGAACACATTCTTTGGTGGGGCCGACTACTTGTGTTAGTCAGTCGTTGAAGCTCAGCAAGCTTACCTTACGTGAAATGGAGGATTCATTGGAACTTGTGGAGTGTGTCAATGGAGAGACACTGGAAGAACTTGAGGAAACATCTATTGACGATGTTGTAGAAAAACCTCTTGACGTTGTTGACCACCAAACTGTGAAGAGGCAGGTTGTAGGACTCGAAGATTTTGAAATTATGAAGGTTGTTGGGCAAGGCGCATTTGGAAAAGTGTTTCAAGTAAGGAAGAGGGGTACTTCTGAAATATACGCAATGAAGGTCATGCGTAAGGATAAAGTTATGGAGAAGAATCATTCGGAATACATGAAAGCTGAGAGGGATATTTTAACGAAAGTGGATCACCCCTTCATCGTGCAGCTCAGATACTCGTTTCAAACCAAGTACAGACTGTACCTTGTGCTGGATTTTGTAAATGGGGGTCATCTGTTTTTTCAGCTCTACCGCCATGGTCTTTTCAGAGAGGATCTGGCTCGCATATATACTGCTGAGATTGTTTCCGCTGTTTCTCATCTCCATGCAAATGGCATAATGCATAGGGATCTCAAACCAGAAAATATCCTTCTGGACGCAGATGGTCACGCCATGTTGACTGATTTTGGCCTGGCAAAGCAATTTGAAGAGAATAAGAGATCAAACTCGATGTGTGGAACAGTAGAATATATGGCGCCTGAAATTGTTCTTGGGAAGGGCCACGATAAGGCTGCAGACTGGTGGAGCGTGGGAATCCTATTGTTTGAGATGCTCACTGGGAAGCCACCTTTTATTGGTGGTAATCGCGAGAAGGTTCAGCAGAAGATAATAAAGGATAAGATCAAGCTGCCAGCTTTTTTGTCAAGCGAAGCGCATTCGTTGTTGAAGGGGCTGTTGCAGAAGGAAGCCAGCAAGCGCCTTGGCAGTGGACCAAGTGGGGGCGAAGAGATAAAGCACCACAAGTGGTTAAAGCCTATCAACTGGAAGAAATTGGAGTCCCGAGAGATCCAGCCGAGCTTCCGTCCAGAAGTTGCTGGGAAACATTGCATTGCCAACTTTGAGGAGCGCTGGACCAACATGCCACTGTTAGATTCTCCGGTTGCCAGCCCAACTACCAGTGATATCAACTTCAAGGGGTTCTCTTATGTGAGGCCCACTTCCCCCTTTTTTCAAAGGAATGGCTCATTCTATTAG 1452 0.4539 MVSSEISGLTGTRMCKYFPSQLLLPMGPPDVVPSDHIEFDFSDVFGPSPNQASIEVSLGNSVLDANELVFDDPMVIYSRTHSLVGPTTCVSQSLKLSKLTLREMEDSLELVECVNGETLEELEETSIDDVVEKPLDVVDHQTVKRQVVGLEDFEIMKVVGQGAFGKVFQVRKRGTSEIYAMKVMRKDKVMEKNHSEYMKAERDILTKVDHPFIVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYRHGLFREDLARIYTAEIVSAVSHLHANGIMHRDLKPENILLDADGHAMLTDFGLAKQFEENKRSNSMCGTVEYMAPEIVLGKGHDKAADWWSVGILLFEMLTGKPPFIGGNREKVQQKIIKDKIKLPAFLSSEAHSLLKGLLQKEASKRLGSGPSGGEEIKHHKWLKPINWKKLESREIQPSFRPEVAGKHCIANFEERWTNMPLLDSPVASPTTSDINFKGFSYVRPTSPFFQRNGSFY* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02392 483 Gene3D Phosphorylase Kinase; domain 1 150 450 - -
Eupl05g02392 483 ProSiteProfiles Protein kinase domain profile. 153 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g02392 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Eupl05g02392 483 Pfam Protein kinase domain 153 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g02392 483 SUPERFAMILY Protein kinase-like (PK-like) 150 475 IPR011009 -
Eupl05g02392 483 Pfam Protein kinase C terminal domain 431 468 IPR017892 GO:0004674|GO:0005524|GO:0006468
Eupl05g02392 483 SMART pkinase_C_6 410 470 IPR000961 GO:0004674|GO:0005524|GO:0006468
Eupl05g02392 483 SMART serkin_6 153 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g02392 483 ProSiteProfiles AGC-kinase C-terminal domain profile. 410 478 IPR000961 GO:0004674|GO:0005524|GO:0006468
Eupl05g02392 483 PANTHER RIBOSOMAL PROTEIN S6 KINASE 130 474 - -
Eupl05g02392 483 FunFam Non-specific serine/threonine protein kinase 233 428 - -
Eupl05g02392 483 CDD STKc_AGC 159 408 IPR045270 GO:0004674|GO:0005524
Eupl05g02392 483 Gene3D Transferase(Phosphotransferase) domain 1 233 428 - -
Eupl05g02392 483 ProSitePatterns Protein kinases ATP-binding region signature. 159 182 IPR017441 GO:0005524
Eupl05g02392 483 FunFam Non-specific serine/threonine protein kinase 150 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02392 Eupl-Chr5 51527615 51531987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02392 1 481 AGC Kinase Gene Family AT3G08720 67.284 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Eupl05g02392 Pkinase 4.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02392 K04688 - ming:122085711 781.556