Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02379 ATGCAATCCCCACCATTCCTCGGGTGCAGATTTAGAACAGCTTCAGTTGTCGCACTGAGGATGCTTTCTTCCTGCTCCTCCCCAAACCCTAACCCTAGATTTTCCCGCACCATGAGAACCAGCTCTGAGAAACCCCAAGCATCTCATCTTCCTCCCTTCTCCAACCTAAAGATTTCCCACCCTCAGAACCTCCATCAAAGCACCACCGTCTCCAAATCCTTCTCTATGGTTTCAAATCATCCCAGTTCCTTGATACCCACTTCAAGTACCTCCGAAATGAGAAACCCAGAACCCGTAACGGATGACCCGATTCAACATTCTCTCGTCGTCGTCTCCTTCTACAAGTTCGCGGATTTCCCGGACCACGCTGATATGCGCAAGCCATTAAAGGAGCTCTGCGAGGAAGTGCGTGTTTCAGGTGGTATTATTCTTGCACCGGAAGGAATCAATGGGAGCATTTGCGGGACACGAGAATCAGTGGAAAGGGTTCTTGGATTCATTCAAGCTGATAACCGCCTAGAGGGACTAAGACAGGTTGAGTCGCCTGTGAGTCCAGAGGAAGAAGCTATTCATCATGGACACACTAGCAGTTCCCCACTTGGTGCTGGAGAAGATGCACCCTTCCGATGGGATCATGTGCGGGTAAAGGTGAAAAAAGAGATTGTTTCTCTTGGAATGCCTACTGTATCACCCATCAAAAGAGTTGGAAAGTATGTGAGCCCAAATGATTGGAATGCATTGATAAGTAATCCAGATACGGTGGTGATTGACGTACGCAATATTTATGAGACCAGAATTGGGAAGTTTAAAGGAGCGGTTGATCCATGTACAACGGCGTTTCGGGAGTTCCCAACCTGGGTGGATGATGAGTTCCAACTAGCCGAACCAGATGTTGGACAACCAAAGGCAGAGTTTGATGGCTCAAATGAAAACACCAGAGAACAACCCGAACTTCAGGAACGAAAAATGCCACCCCGGGTTGCAATGTACTGCACAGGTGGAATTCGATGTGAGAAAGCTTCAAGTTTTCTCCTCAGCAAAGGCTTCAAAGAGGTTTATCATTTGGAAGGAGGGATTTTGAAGTATCTAGAGGAGGTTCCAAAGGCAGAGAGCCTTTGGGAGGGTGAGTGCTTTGTGTTTGATAAGCGAGTCTCAGTTGAGCATGGGTTGGTCCAGGGCAACTTCAAGCTCTGCTATGGGTGTAAGCAACCGGTGAGTGACACAGACATGGAAGCCCCAGAGTGGGAATATGGAGTTTCTTGCCCATACTGTTTCTCGACAAGATCTGAAGAAGAAAAAGAGAGGGCAAGAGCTCGACAGAGGCAATTTGAGACATGGGGCATAATTGGTGGTCCTGACAAGGGTCGCCGGCCAATGACAACCGAAGATGGTAGCCACATAAAGGCTTCTCATCTTTCAAATTCAGTTTGA 1431 0.4794 MQSPPFLGCRFRTASVVALRMLSSCSSPNPNPRFSRTMRTSSEKPQASHLPPFSNLKISHPQNLHQSTTVSKSFSMVSNHPSSLIPTSSTSEMRNPEPVTDDPIQHSLVVVSFYKFADFPDHADMRKPLKELCEEVRVSGGIILAPEGINGSICGTRESVERVLGFIQADNRLEGLRQVESPVSPEEEAIHHGHTSSSPLGAGEDAPFRWDHVRVKVKKEIVSLGMPTVSPIKRVGKYVSPNDWNALISNPDTVVIDVRNIYETRIGKFKGAVDPCTTAFREFPTWVDDEFQLAEPDVGQPKAEFDGSNENTREQPELQERKMPPRVAMYCTGGIRCEKASSFLLSKGFKEVYHLEGGILKYLEEVPKAESLWEGECFVFDKRVSVEHGLVQGNFKLCYGCKQPVSDTDMEAPEWEYGVSCPYCFSTRSEEEKERARARQRQFETWGIIGGPDKGRRPMTTEDGSHIKASHLSNSV* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02379 476 MobiDBLite consensus disorder prediction 26 60 - -
Eupl05g02379 476 ProSiteProfiles Rhodanese domain profile. 249 371 IPR001763 -
Eupl05g02379 476 SMART rhod_4 239 368 IPR001763 -
Eupl05g02379 476 Hamap tRNA uridine(34) hydroxylase [trhO]. 106 408 IPR020936 -
Eupl05g02379 476 MobiDBLite consensus disorder prediction 180 203 - -
Eupl05g02379 476 MobiDBLite consensus disorder prediction 449 476 - -
Eupl05g02379 476 MobiDBLite consensus disorder prediction 72 102 - -
Eupl05g02379 476 Pfam UPF0176 acylphosphatase like domain 109 221 IPR040503 -
Eupl05g02379 476 MobiDBLite consensus disorder prediction 72 96 - -
Eupl05g02379 476 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 218 397 IPR036873 -
Eupl05g02379 476 CDD RHOD_YceA 236 364 - -
Eupl05g02379 476 Gene3D - 223 406 IPR036873 -
Eupl05g02379 476 Pfam Rhodanese-like domain 243 364 IPR001763 -
Eupl05g02379 476 Gene3D - 99 222 - -
Eupl05g02379 476 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 105 440 IPR020936 -
Eupl05g02379 476 MobiDBLite consensus disorder prediction 298 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02379 Eupl-Chr5 51299592 51306110 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02379 107 463 Sulfurtransferasese or Rhodanese AT2G40760 77.933 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02379 - - ming:122086305 736.487