Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02378 ATGTCACAGACATGGACCGAAGTCACTTCTACTCCTATCGAAGACGGCTTTGCGTGGAGAAAATACGGGCAAAAGGAGATCCTCAACTCCAAATTTCCAAGGAGCTACTTTAGGTGCACTCACAAGAATGATCAGGGGTGCCAGGCAATCAAACAAGTGCAGAGAACCGAAGATGATCCTGTGATGTACCGGACCACATACATGGGCCATCATACATGCACAGAAACACTGAAGGCTCCTCAACTAATCTTGGATTCTTCTCCTAAAGACGAGTATCTACTCAATTTTCAATCAAACAGCACAAGTAAACAAGGGTATCCCTTCCGTTCATCCTTCCCTTCGATAAAACAGGAATGTAATGATCAGACGACCCAGAATCACTCCTCCTCGGACTATCTTCTGTCGCCCGATCTGACGACATTTGAATCATCTGGGCCCGCAACGATGTTGGCTTCCACTCCAGGATCCGATCATGGCGATGTAATTTCTGGCGTCTACTGGTGTACAAGTTCTCAGAGTTTGGACATGGGTTTGGTGGTGGGGTCCGTTGATTTTGATGATGTGTTCCACTTTGACGAAGATTTCTTTAAGTCTTAA 597 0.459 MSQTWTEVTSTPIEDGFAWRKYGQKEILNSKFPRSYFRCTHKNDQGCQAIKQVQRTEDDPVMYRTTYMGHHTCTETLKAPQLILDSSPKDEYLLNFQSNSTSKQGYPFRSSFPSIKQECNDQTTQNHSSSDYLLSPDLTTFESSGPATMLASTPGSDHGDVISGVYWCTSSQSLDMGLVVGSVDFDDVFHFDEDFFKS* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02378 198 SMART WRKY_cls 13 75 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl05g02378 198 SUPERFAMILY WRKY DNA-binding domain 6 74 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl05g02378 198 ProSiteProfiles WRKY domain profile. 8 71 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl05g02378 198 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 5 110 IPR044810 GO:0003700
Eupl05g02378 198 Pfam WRKY DNA -binding domain 14 73 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl05g02378 198 Gene3D WRKY domain 1 68 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02378 Eupl-Chr5 51286988 51288905 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02378 2 81 WRKY Transcription Factor Family AT3G56400 61.250 2.04e-30 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl05g02378 WRKY 7.1e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02378 - - nnu:104593755 227.254