Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02377 ATGTCAAAAAACCAGCAGACAAAAGCTCCGTATCGATCGATCCCCTCAAACATGGAGGAAGCCTTGTCTTTAATCATCCATGGCTGCAAGTTAGCAAGAGACCTTGAATTAAATCTCCCACACTTATCAACCCAACCCATTTTTCTATCAAATTCTTGTGATGAAATTGTTAGGGTCTTCAACACCGCCATGGATCGATTGAATTCTTACAACCCATCATCTTCAAATCCCCATATGGTTTTCCAAGAGTCGCCGCCGCAAGCTCGACCGTCCGAGCTTGATGTAGGAGTGCAAGAATGGTTGAAGTCTAGTTACAAGCAAGCCATGGATGTTCTACAAGCTCAATTCTTAGCTGATCCTAAGAACCCATTCAGTAAGGTCGGTATGATGGAGCCACCGGAGTTGGGATTGGAAATTCCGGCAGCTACATCCGGCTTAGGGGTCCTTGAATTGGGTGTAACAGATACGGACTATGTAGGAGATACAGATGGTTCTACACGTTCAAAGAGTGAAGGGAAGTTTCAGATGCAAGAGGGGTCAGAATCCGGTAAGAGTACTCCGATGGCGGCGCAAAGATCGCGAAAGAGGAAGGATAGTGTGGACAAACACACGATGACGGTTGCTGCCCCTCGAATGGGAAATACGGAGATTCCACCAGAAGACGGATTTACTTGGAGAAAGTACGGTCAGAAAGAGATACTAGGGTCAAAGTTTCCTAGGGGCTACTATAGGTGCACCCACAAGAGCTTCTACGGGTGCGAGGCAAAGAAGCAAGTTCAGCGACTGGACAATGATCCCGACACGTTTGAAGTGACTTACTATGGATCCCACACGTGTCTCATGTCATCAACGGCTCCATCAGTCCCGCCCTCGGCTGATATCAAACAAGAGGCGGTGATAACAACACGATCGTCATCACCCACTACTTCAATCCCGCTAAGTAGATGGCTGTCTATGGACTTCGAAGCAATGAGTAGAAAAGACACAAGTACCCTTATGGATCCACACATGCACAGGGATTTTAACATGGGTGGTAGCGGAAGTAGCAGCGCTGGTGCTGCGGGCACCTCGCACGTGCGTGATGCGAAAGAACCCGAATCTCCTGTGTTGTATCTTGCTGATGCCATGTTTAATTCTGGGAGCAGTAGCAATAGCATGGATTCCATCTTCCCTCCAACGCAAGACAAATAG 1191 0.4777 MSKNQQTKAPYRSIPSNMEEALSLIIHGCKLARDLELNLPHLSTQPIFLSNSCDEIVRVFNTAMDRLNSYNPSSSNPHMVFQESPPQARPSELDVGVQEWLKSSYKQAMDVLQAQFLADPKNPFSKVGMMEPPELGLEIPAATSGLGVLELGVTDTDYVGDTDGSTRSKSEGKFQMQEGSESGKSTPMAAQRSRKRKDSVDKHTMTVAAPRMGNTEIPPEDGFTWRKYGQKEILGSKFPRGYYRCTHKSFYGCEAKKQVQRLDNDPDTFEVTYYGSHTCLMSSTAPSVPPSADIKQEAVITTRSSSPTTSIPLSRWLSMDFEAMSRKDTSTLMDPHMHRDFNMGGSGSSSAGAAGTSHVRDAKEPESPVLYLADAMFNSGSSSNSMDSIFPPTQDK* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02377 396 Gene3D WRKY domain 205 281 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl05g02377 396 MobiDBLite consensus disorder prediction 332 365 - -
Eupl05g02377 396 MobiDBLite consensus disorder prediction 159 204 - -
Eupl05g02377 396 Pfam WRKY DNA -binding domain 220 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl05g02377 396 SMART WRKY_cls 219 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl05g02377 396 MobiDBLite consensus disorder prediction 169 189 - -
Eupl05g02377 396 SUPERFAMILY WRKY DNA-binding domain 217 280 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl05g02377 396 ProSiteProfiles WRKY domain profile. 220 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl05g02377 396 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 25 296 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02377 Eupl-Chr5 51269291 51272354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02377 11 391 WRKY Transcription Factor Family AT2G40740 34.646 8.58e-52 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl05g02377 WRKY 5.8e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02377 - - nnu:104593988 351.673