Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02369 ATGGGTTCTTCGTCTTCATCGTCATCATCAAATGGGTTGGATTGTGGAAAGGAACCTCATGTGTTAGCTGTTGATGACAGTGTCATTGATAGGAAACTTATAGAGAAACTTCTTAAGAATTCTGATTGTAAAGTGACTACGGCAGAAAATGGGCTACGGGCATTGGAGTATTTGGGGTTGGGAGAACAGGGCACCTTGGAAACAAGCGATTTGCAGGTAAATATGATAATTACTGATTATTGTATGCCGGGAATGACAGGATATGAGCTACTTAAAAAAATTAAGGAGTCATCTACCATGAGGGAGATTCCAGTCATAATAATGTCATCTGAGAACATCCCAACTCGAATCAACAAGTGCTTAGAGGAAGGAGCTCAAGGGTTCATGATGAAGCCCCTCCAGCAATCAGATGTGAAGAAATTGAGATGTCATATGATGAAATTCAGCAAACCATGTAATGGGAGACTTTGCCTGGGAAGGTAA 483 0.4099 MGSSSSSSSSNGLDCGKEPHVLAVDDSVIDRKLIEKLLKNSDCKVTTAENGLRALEYLGLGEQGTLETSDLQVNMIITDYCMPGMTGYELLKKIKESSTMREIPVIIMSSENIPTRINKCLEEGAQGFMMKPLQQSDVKKLRCHMMKFSKPCNGRLCLGR* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02369 160 FunFam Two-component response regulator ORR5 19 148 - -
Eupl05g02369 160 SUPERFAMILY CheY-like 18 143 IPR011006 -
Eupl05g02369 160 ProSiteProfiles Response regulatory domain profile. 20 146 IPR001789 GO:0000160
Eupl05g02369 160 SMART REC_2 19 142 IPR001789 GO:0000160
Eupl05g02369 160 Pfam Response regulator receiver domain 21 140 IPR001789 GO:0000160
Eupl05g02369 160 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 147 IPR045279 GO:0009736
Eupl05g02369 160 CDD REC_typeA_ARR 21 141 - -
Eupl05g02369 160 Gene3D - 20 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02369 Eupl-Chr5 51086679 51089926 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02369 17 146 Response Regulator Gene Family AT3G56380 69.925 9.05e-64 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl05g02369 Response_reg 2.3e-23 CL0304