Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02366 ATGAGAAAGCTAGTTAGTCTCTTCGCCATTCTCCTTTTTGTTCCGGCTTTCGTTAGATCGTTGGATCCGACTCTCAATGACGACGTTCTTGGGTTGATTGTCTTCAAGGCCGACCTCCAAGATCCAGACTTGAAGTTGATATCGTGGAATGAAGACGAGGACAGTCCCTGCAACTGGTGCGGAGTGAAATGCAACCCTAGAAATAACCGGGTCTCGGAGCTCGTCCTCGACGGGTTCTCTCTCTCTGGACGGATCGGCCGAGGCCTCCTCCAACTCCAATTCCTCCGCAGACTGTCGCTCTCAAAGAATAATTTCACGGGTACCATAAACCCTAATCTTGCCCGTATGGAAAGCCTGCGAATTATCGACCTTAGTGACAACAATCTCTCTGGATCAATTCCTGATGATTTCTTTCGACAATGTGGGTATTTAAGAGCAGTTTCTTTTGCCAGGAACAACTTGTCAGGGCGGATCCCACAGAGTTTGAGCTCGTGCACCACGCTTGCAGGTGTTAACTTCTCCTCGAATCAGCTATCCGGTCCGTTGCCCTCTGGAATCTGGTCTTTGAGCGGTCTTCGATCACTTGATCTATCAGATAATTTGCTGGGGGGCGAGATTCCAACAGGGATCGACGGTTTGTATAATCTGAGAGCAATTAATTTACGGAAGAACCAGTTTTCTGGGCGATTGCCGGATGACATCGGAGGTTGTTTGCTTTTGAAAGTGCTTGATTTCAGTGAGAATTCTCTATCTGGGAGCCTTCCAGATCCAATGCAGAAACTAACTATGTGCAAATATCTAAGTTTACATGCGAATTCATTTGTCGGAGAAGTTCCAGCATGGATTGGAGAAATGAAAAGCCTTGAGACTTTGGATCTTTCCAGGAACGGATTTTCCGGCCAGATACCAGATTCAATGGGAAATCTTCAGTTACTGAGAGTATTGAATTTATATGAGAACAAGTTGAATGGGGATTTTCCAAAGTCATTGATCGATTGCCAAAGCCTTTCTGCCATGGATTTTAGCCGGAATTCATTGACAGGTAATCTTCCAGCATGGATTTTTGAGATGGGCTTACAGATGATTTCGCTTTCGGAAAACAGACTAACTGGATCGATAGAAATTCTAACTTCCCCATCAATGGACGCCTCGTACCAGAAGCTTCAAGTCTTGGACTTGTCTCAAAATGCATTTTCGGATGAAATTCCATCCGAAATTGGGGTATTTAGCAGCTTGCAGCTCTTGAACATGTCCAGGAACTCTCTTGTTGGTGCTATTCCGGCGAGTGTAGGTGAATTGAAGGCTGTAGATGTTCTTGATTTGAGTGAGAACCAACTAAATGGGAGCATCCCTTCAGAAATTGGAGGAGCAGTTTCCTTGATGGAACTGAGGTTAGAGAAGAACTTCCTAGCCGGGAAAATTCCGACCCAGATCGAGAAATGTTCATCTCTAAATTCTCTGATCTTGTCACAGAACGAACTCACAGGCCCAATCCCAGCAACCATAGCCAACCTCACTAACCTCCAAACTGTAGACTTATCTTTTAACAACCTTAATGGAAGCTTGCCCAAGCAGCTTGCAAATCTCCCCCACCTACTTTCCTTCAATGTTTCCCACAACCACCTCCAAGGTGAGCTACCCGCTGGCGGATTCTTCAATACCATTTCCCCCACCTCTGTTTCGGGTAATCCATCCCTATGTGGCTCTGCTGTCAACCGCTCTTGCCCTGCTGTCCTTCCCAAACCCATTGTCCTCAATCCTAATTCCTCATCTTCTGACTCTGGTGCTGGCTCTATCTCACCTAACCTCCGCCACAAGAAGATCATCTTCAGCATCTCCGCGCTAATTGCCATCGGTGCAGCTGTTGTTATTGCTCTTGGTGTGGTTGCTGTCACTGTTCTCAACCTCCGTGTACGGTCCTCCACCTCCCGTTCTGCCATTGCCCTCACATTATCACGTGGTGATGACTTCAGCCATTCCCCCACTACTGATGCCAACTCCGGCAAGCTTGTCATGTTCTCGGGTGATCCTGACTTCAGTGCTGGTGCCCATGCACTGCTCAACAAGGACTGTGAGCTTGGGCGTGGTGGGTTTGGAGCTGTCTACAAAACAGTCCTCCAAAATGGGCGTCCAGTTGCCATCAAGAAGCTAACTGTCTCAAGCCTGGTCAAGTCCCAAGAAGATTTTGAGAGAGAAGTTAAGAAGCTTGGAAAGATCCGGCACGATAATCTCGTAGCCCTTGAAGGGTATTACTGGACCACGTCGCTACAGCTCCTGATTTACGAATTTGTTCCTGGCGGGAGCTTGTATAAGCATCTCCATGAGGGAGCGGGTGGAAACATCCTCTCATGGCACGAGAGGTTCAACATAATTCTTGGGACAGCAAAAAGCTTGGCTCACTTGCACCAAATGAACATAATCCACTACAATCTGAAATCAAGCAATGTCTTGATTGACAGCTCTGGCGAACCAAAGGTTGGAGATTTTGGCCTGGCGAGGTTGCTGCCGATGCTAGACCGTTATGTTCTCAGCAGCAAGATACAAAGCGCACTTGGGTACATGGCGCCAGAGTTTGCATGCAGGACGGTGAAAATAACTGAAAAGTGTGATGTGTATGGATTTGGTGTCTTGGTTCTGGAAGCGGTTACAGGAAAGAGGCCGGTGGAGTATATGGAGGATGATGTGGTGGTGCTTTGCGACATGGTGAGAGGGGCATTAGAGGAAGGGAAGGTAGAGGAGTGTGTGGATGCGAGATTGCGCGGTAACTTCCCAGCAGAGGAGGCAATTCCAGTGATGAAGTTAGGATTGATCTGTACGTCTCAGGTTCCATCGAACCGGCCGGACATGGGAGAGGTGGTTAATATATTGGAGCTGATCAGATGCCCTTCGGAAGGTCAAGAGGAGTTGGTATGA 2913 0.4761 MRKLVSLFAILLFVPAFVRSLDPTLNDDVLGLIVFKADLQDPDLKLISWNEDEDSPCNWCGVKCNPRNNRVSELVLDGFSLSGRIGRGLLQLQFLRRLSLSKNNFTGTINPNLARMESLRIIDLSDNNLSGSIPDDFFRQCGYLRAVSFARNNLSGRIPQSLSSCTTLAGVNFSSNQLSGPLPSGIWSLSGLRSLDLSDNLLGGEIPTGIDGLYNLRAINLRKNQFSGRLPDDIGGCLLLKVLDFSENSLSGSLPDPMQKLTMCKYLSLHANSFVGEVPAWIGEMKSLETLDLSRNGFSGQIPDSMGNLQLLRVLNLYENKLNGDFPKSLIDCQSLSAMDFSRNSLTGNLPAWIFEMGLQMISLSENRLTGSIEILTSPSMDASYQKLQVLDLSQNAFSDEIPSEIGVFSSLQLLNMSRNSLVGAIPASVGELKAVDVLDLSENQLNGSIPSEIGGAVSLMELRLEKNFLAGKIPTQIEKCSSLNSLILSQNELTGPIPATIANLTNLQTVDLSFNNLNGSLPKQLANLPHLLSFNVSHNHLQGELPAGGFFNTISPTSVSGNPSLCGSAVNRSCPAVLPKPIVLNPNSSSSDSGAGSISPNLRHKKIIFSISALIAIGAAVVIALGVVAVTVLNLRVRSSTSRSAIALTLSRGDDFSHSPTTDANSGKLVMFSGDPDFSAGAHALLNKDCELGRGGFGAVYKTVLQNGRPVAIKKLTVSSLVKSQEDFEREVKKLGKIRHDNLVALEGYYWTTSLQLLIYEFVPGGSLYKHLHEGAGGNILSWHERFNIILGTAKSLAHLHQMNIIHYNLKSSNVLIDSSGEPKVGDFGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEAVTGKRPVEYMEDDVVVLCDMVRGALEEGKVEECVDARLRGNFPAEEAIPVMKLGLICTSQVPSNRPDMGEVVNILELIRCPSEGQEELV* 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02366 970 SUPERFAMILY L domain-like 54 304 - -
Eupl05g02366 970 Gene3D Ribonuclease Inhibitor 26 181 IPR032675 -
Eupl05g02366 970 Gene3D Phosphorylase Kinase; domain 1 681 763 - -
Eupl05g02366 970 CDD STKc_IRAK 693 959 - -
Eupl05g02366 970 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 681 763 - -
Eupl05g02366 970 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 764 965 - -
Eupl05g02366 970 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Eupl05g02366 970 Gene3D Ribonuclease Inhibitor 182 280 IPR032675 -
Eupl05g02366 970 ProSiteProfiles Protein kinase domain profile. 687 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g02366 970 Pfam Leucine rich repeat 287 346 IPR001611 GO:0005515
Eupl05g02366 970 Pfam Leucine rich repeat 483 542 IPR001611 GO:0005515
Eupl05g02366 970 SUPERFAMILY Protein kinase-like (PK-like) 691 960 IPR011009 -
Eupl05g02366 970 Gene3D Ribonuclease Inhibitor 287 578 IPR032675 -
Eupl05g02366 970 Gene3D Transferase(Phosphotransferase) domain 1 764 968 - -
Eupl05g02366 970 ProSitePatterns Protein kinases ATP-binding region signature. 693 716 IPR017441 GO:0005524
Eupl05g02366 970 SMART LRR_typ_2 213 237 IPR003591 -
Eupl05g02366 970 SMART LRR_typ_2 433 457 IPR003591 -
Eupl05g02366 970 SMART LRR_typ_2 189 212 IPR003591 -
Eupl05g02366 970 SMART LRR_typ_2 505 528 IPR003591 -
Eupl05g02366 970 SMART LRR_typ_2 529 553 IPR003591 -
Eupl05g02366 970 SMART LRR_typ_2 116 140 IPR003591 -
Eupl05g02366 970 SMART LRR_typ_2 285 309 IPR003591 -
Eupl05g02366 970 Pfam Protein tyrosine and serine/threonine kinase 689 955 IPR001245 GO:0004672|GO:0006468
Eupl05g02366 970 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 186 957 - -
Eupl05g02366 970 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 26 304 - -
Eupl05g02366 970 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 305 579 - -
Eupl05g02366 970 SUPERFAMILY L domain-like 255 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02366 Eupl-Chr5 50994609 50999639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02366 1 969 Receptor kinase-like Gene Family AT3G56370 67.729 0.0 1285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Eupl05g02366 PK_Tyr_Ser-Thr 1.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02366 - - nnu:104594482 1532.31