Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02353 ATGGGGTGTTTCACAGTCTTGAAGAGTAAAAAGAAGAAGTCTGAGCAGCCCATCTACATCAAACGCATTAATCCTCAGAAGAGTACACCCACAGTGCTCCCTGAACCACAAACCCAAAGTAGGTCTCTCCAATCTGCTCCTCCAAGCTTCAGGACCAGAGCCAAACCCATCCAACCAGTTAACCGAATCACTGACAGTAGAACTCGGGCATTATCTGCTCCATCAAGCCTAAATGTGGCCGAGCGTGATTCTCTTTTGTCAATTGAATATGATGAACCAGAAGATTCCAAGAGCCGAGGTGGATTGACAAAGGAACATCGCACGCCAAGTCCACAACCTCTTCCTCTTCCATCGCCTCAGAGTGCTGCCGTCTTGAAGAATATGGGAAGCTTCAAGACAGCTAATTTCAGCGGCCCTATATCTGGCCCTCTGCCACTGCCTCCTTTGGGAGGCCTTCGGAATTTCTCTTATGAAGAGATTGCGTCTGCTTGCCAAAAATTCTCACCAGACAGATGCATGTCCGAAGGTCTTTCTTCAATAATTTATAAAGCTTCCTTTGGAGATGATACCTCCAGTTCCAAGAAGCTGGAAGCCACTGTTACTCGTCTTCTTCCATCAACTCAGGGGTTCAAAGAATTCGTTAATGAGGTCAATACGCTTGCGTCCTTGCAACATCCTCAGCTCTGTAAATTGCTTGGTTTCCATGCACGTGAGGGATCAGACCAAAGGATGCTGGTCTATGAGAGGCTTTCTCATGGAAGCTTAGACCTACTCCTGTATGGTAGATCTGATGGGCCCCCTATTGACTGGTGTACTAGGATGAAGGTGGCTCTCTGTGCTGCACAAGGTCTTGCTTTTTTGCATGAAGAAGGGCCCTTCCAGGCAATGTACAATGAGTTCTCAACTGCCAACATACAGGTTGACAAGGACTTCAGTGCGAAGCTTTCAGGTTATGGTTGTGTCAGCCATGATCCAGAAGCCGAGATCTCAAATACTTCCCCCGCGGTAGCAAATCTTTCAGTGGAAACCTTGGAGAGAGGACAACTCACTCCAAAGAGTAATGTATGGAGCTTTGGTATCGTTCTACTTGAACTACTCACCGGCAGGAAGAATCTTGACAACCGATACCCCAAGGAAGAGCGGAACTTGGTTAAATGGAGCCGACCTTTCTTAGCTGATGATTGCCGGCTATCGCTGATCATGGATCCCCGGCTAAAAGGTCGGTTCGCTGCCAAAGCGGCTCGTACTGTGGCTGACATTGCTCTAAGATGCCTCCAGAAGGAACCCTCGGAAAGACCCACCATACGAACCATTGTTGACTCTCTCAAAAACATCCAAGACATGAAATACTCCTGTCGGTTTCCTCTCCAAGAACCAGCAACAGTTGCAGGAAAACAGATGTTAAGGTCCCCAAGTCTCAATGGGATTGTTACCCAAGCACCTAGATTAAATTTCTCCCCTTCCCCAACTTCGAGAACCCGGCCATCTGTTTCTCCGACAAGGCAGCCCTTGATGCCCATGTCACTTCCTCCCCGATCTTGTTCATCTACTGTCACATTGGAGGAGAATGAGCCGCAGAAAAGTCGGAAATCTGCCTCTTCAACAGTTGGAAGGGATGGAGGTGAAGGGTTCTAA 1635 0.4801 MGCFTVLKSKKKKSEQPIYIKRINPQKSTPTVLPEPQTQSRSLQSAPPSFRTRAKPIQPVNRITDSRTRALSAPSSLNVAERDSLLSIEYDEPEDSKSRGGLTKEHRTPSPQPLPLPSPQSAAVLKNMGSFKTANFSGPISGPLPLPPLGGLRNFSYEEIASACQKFSPDRCMSEGLSSIIYKASFGDDTSSSKKLEATVTRLLPSTQGFKEFVNEVNTLASLQHPQLCKLLGFHAREGSDQRMLVYERLSHGSLDLLLYGRSDGPPIDWCTRMKVALCAAQGLAFLHEEGPFQAMYNEFSTANIQVDKDFSAKLSGYGCVSHDPEAEISNTSPAVANLSVETLERGQLTPKSNVWSFGIVLLELLTGRKNLDNRYPKEERNLVKWSRPFLADDCRLSLIMDPRLKGRFAAKAARTVADIALRCLQKEPSERPTIRTIVDSLKNIQDMKYSCRFPLQEPATVAGKQMLRSPSLNGIVTQAPRLNFSPSPTSRTRPSVSPTRQPLMPMSLPPRSCSSTVTLEENEPQKSRKSASSTVGRDGGEGF* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02353 544 Gene3D Transferase(Phosphotransferase) domain 1 250 454 - -
Eupl05g02353 544 PANTHER OS01G0588500 PROTEIN-RELATED 92 446 - -
Eupl05g02353 544 MobiDBLite consensus disorder prediction 85 104 - -
Eupl05g02353 544 Pfam Protein tyrosine and serine/threonine kinase 174 442 IPR001245 GO:0004672|GO:0006468
Eupl05g02353 544 Gene3D Phosphorylase Kinase; domain 1 149 248 - -
Eupl05g02353 544 MobiDBLite consensus disorder prediction 17 121 - -
Eupl05g02353 544 ProSiteProfiles Protein kinase domain profile. 167 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g02353 544 MobiDBLite consensus disorder prediction 479 544 - -
Eupl05g02353 544 MobiDBLite consensus disorder prediction 479 522 - -
Eupl05g02353 544 MobiDBLite consensus disorder prediction 21 51 - -
Eupl05g02353 544 MobiDBLite consensus disorder prediction 59 82 - -
Eupl05g02353 544 SUPERFAMILY Protein kinase-like (PK-like) 147 452 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02353 Eupl-Chr5 50815572 50822256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02353 137 446 Receptor kinase-like Gene Family AT4G02010 37.658 3.64e-58 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Eupl05g02353 PK_Tyr_Ser-Thr 1.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02353 - - nnu:104594491 879.782