Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02347 ATGGACACACACATATCACGATGGATCCTCGAATTCTTTCTTCGACAGCCGATTGAAGATCGTGTGGTGAACACTCTTCTCTCTATTCTTCCCCTCCCGAATGACGATCGTCTGATGAAAACAATACTTCTGAGAAGAATCTCTTCGGAAATTTCCAACGGTTCAATTTCGGAAAAGATTCTCGAATCTCTGGAGATGATCGAAGAGTTAGATCACAAAGAGGGAAAAGCGGTTTTGGATTCGATGCAGGAAGCTTACTGTGCAGTCGCGGTGGATTGCGCGGTGAAGTTCTTGAGAGAGAATTCGAATGATTGTCGCAAGTATTTTGATGCGGTTATTAGGATTTGGAGAGGTAGGATATGTGACATAGAGAGATGGGGGAGCGTTGGTTTGGTTTCGGATCAGTTGAGGGAAACAAGGGATGAGATTGAGGCGGCAGTGTGGAGTGTCAGTGTTCGAAATAATGTTACAATGAAGGATACACGGAGCAATGCTTTTAAATCGGTTAAAGTTTTTCTAGTGGAAGCAGTGGAAGAAATGGGCCCTTCTTTTCTGGAATCAGCAGCTGAAAAGATGTATGAGAAGGGGAAAAACGTGCTGGTTCCAACTAATTCTTTAACATCCCATCAAGTTGGAGAGAGACAAGCATGTCCGCCTGACGCCCCCCATGAGGATTTGGATGTTGGCAATGAAAATGTTGCAGGACATAACGGTAGTGACATGGATCTGGATTCTTCTATGGAGATTCCTCATGCAGCAAATAATAAATACAATCTAGTGCCAACACCAGAAATTAGAAAAGTACAGGAAGCACTTAAATCAAGTTCTTTAGATTTACGGGCAATGGTGAAAGATCCTCTTCCTGATGCATTACGCATGGCTGCAACCATATCATCCAATATGGCAAGAGAAGAGATAAATTATGAGCATTCAGTAGAAAACCAAAATGTCGTAGACATGGATGTATGCATTCCTTCTGTTGGCGAGGGTGTTGAAGCTGTTCACACAAAGGAAGTCAGTACCGGAAATCAAAATGGGGTTTTGCGACCTAGCATAATGACTCGGAATAGTACTGCTCGTACTTATGAGTGGGGTGATGATTCAATTGAGTCCTCACATGAAGGTTCACCAAATCGTCCCCACTTACCTACCCCAAAGAATAGAGTTTTTTCTCCATTGCGACAACAAGAAGTCAGGAAAATTACTAGAAGGAGAAAATTTAAGAAATGGAGTTCCTTGGAGGAACAAACTTTGAGAGATGCTGTAAAAGAGTATGGTAAGGGGAACTGGAGCCTCATCTTAGACAACTATCGTGAAACATTTGAAGAGAGAACTACGGTAAATATGGTCTTGTTCATTGACAAAGTCTTTGGTTTGTTTAGCCTGATTGATTATTAA 1398 0.4199 MDTHISRWILEFFLRQPIEDRVVNTLLSILPLPNDDRLMKTILLRRISSEISNGSISEKILESLEMIEELDHKEGKAVLDSMQEAYCAVAVDCAVKFLRENSNDCRKYFDAVIRIWRGRICDIERWGSVGLVSDQLRETRDEIEAAVWSVSVRNNVTMKDTRSNAFKSVKVFLVEAVEEMGPSFLESAAEKMYEKGKNVLVPTNSLTSHQVGERQACPPDAPHEDLDVGNENVAGHNGSDMDLDSSMEIPHAANNKYNLVPTPEIRKVQEALKSSSLDLRAMVKDPLPDALRMAATISSNMAREEINYEHSVENQNVVDMDVCIPSVGEGVEAVHTKEVSTGNQNGVLRPSIMTRNSTARTYEWGDDSIESSHEGSPNRPHLPTPKNRVFSPLRQQEVRKITRRRKFKKWSSLEEQTLRDAVKEYGKGNWSLILDNYRETFEERTTVNMVLFIDKVFGLFSLIDY* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02347 465 PANTHER MYB TRANSCRIPTION FACTOR 1 449 - -
Eupl05g02347 465 ProSiteProfiles Myb-like domain profile. 402 445 IPR001005 -
Eupl05g02347 465 MobiDBLite consensus disorder prediction 367 388 - -
Eupl05g02347 465 CDD SANT_TRF 408 449 - -
Eupl05g02347 465 SUPERFAMILY Homeodomain-like 404 448 IPR009057 -
Eupl05g02347 465 Gene3D - 399 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02347 Eupl-Chr5 50721067 50726883 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02347 379 449 Single Myb Histone (SMH) Gene Family AT1G15720 42.254 4.41e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl05g02347 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02347 K11111 - csin:114301595 404.06