Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02341 ATGAGTTGTGGTGAGGAGAACAAAGAAGGTGGAGAAGAAGGGGAATTGAAGCAAACGGGAACGGACAAGTCTGCTGAGGTTGGTGTCTGTCATGGGAAGCACTCAATCACCCAGAATGGATCGATCCCAGTCCCACGGTTCAATATTGACAACAAACTATTGATTGACCCAAAATTACTGTATGTTGGAATGAAGATTGGAGAGGGAGCCCATGGGAAAGTTTACGAAGGAAGGTGTGGTGACCAAATCGTTGCAATCAAAGTTCTCAATTGTGGAAATACCCCAGAAGAAAGAGCAGCACTTGAAGGTCGGTTTGCCCGGGAAGTTACTATGATGTCTAGAGTAAAACATGAGAACCTAGTCAAGTTTATTGGAGCTTGTAAGGATCCTCATATGGTTATAGCTACAGAGCTTTTACCAGGGATGTCACTCCGGAAGTATTTGATCAGTATACGCCCAAAACAACTAGATCTTCACTTGGCCATAGGTTTTGCCCTTGACATTGCCCGGGCCATGGAATGTCTACATGCCAATGGTATCATACACAGAGATCTGAAACCTGATAATTTGTTGCTTACGGAAAATCAGAAGTCTGTGAAGCTTGTTGATTTTGGTCTTGCAAGAGAAGAATCTGTGACGGAGATGATGACTGCAGAAACTGGAACATATCGTTGGATGGCTCCCGAGCAATTGAATGTGGCCGTGCAGTTATACAGCACCGTTACATTGAGGCAGGGGGAGAAGAAGCATTACAATAACAAGGTTGATGTCTACAGCTTTGGGATTGTTCTGTGGGAGTTATTGACCAATCGAATGCCATTTGAGGGCATGTCCAACTTGCAGGCTGCTTATGCTGCTGCTTTTAAGCAAGTGAGGCCAAGTCTTCCAGAAGACATATCTCCAGATCTTGCGTTCATCGTACAATCATGTTGGGTTGAGGACGCTAATGTGCGGCCGAGCTTCAGCCAGATCGTTCGCTTGCTCAATACATTCCTCTTCACACTATTGCCACCTTCGCTCCCTTTGACTGAATCTGACACCATCAAAGCGGCAGTATCATCAAGTGACAGTATCATCACTGAGTCGTCTGCACGTGCTAGAGGGAAGTTCTCTTTCCTACGCCAGCTTTTTGCTGCAAGGAGGACAAGGAACACAATGAATGGATTGGTTGCTGTCAACGTAGAACAGAGAAATAGAGGAGAACAAGCTCTGATTCGAAGCTGTAAAGCCTACGAAAGTTTATTGATGGATAAGTCACAAGATCCCTGTAATCTCGAGGCTAGTGGCGATGACCATTGCTCTTCTTCATCCTCTTCTTCATCCTCCACTAGTTCTGCATACCGACTGTTTGATCGCCAAAGATCAATTTACCAGATAATGGGAGGTGGTAAAGCTGCCGATGTCATCTTGTGGAAACAAGGGCATGTTTCGTTTGGCATCATCGTAGTGGCTACGATTGCATGGATCCTATTTGAGCGATCGGGATTGTCATTCTTATCAATTTCGTCAGACGTATTGCTGGTTTTAATTGTAATTCAGTTTCTTCGAGCCAACTATGCTGTTCTCCGGAATAAACAACTTCGACCATTGCCAGAACTGGAATTGTCAGAAGAAATGGTTAACAATTCTGCAGCATCGTTTCGTGTTAAAATCAACTATATGCTTCTCATGGCGCATGATATCACTCTTGGCAAAGACTTCAGATTATTTTTTAAGGTGGTGGTTTGTCTGTGGCTCTTGTCTGTGATTGGTAGCTTCTTCTCATTCTTCACACTTGCGTATGTTGGAACTATCATGTCAATTACGGTTCCAGCCTTGTACAATAAATATGAAGAGCATGTGGATAGATACGCGGGGTTGGTCCATAAGAAATTTTCGAAGCACTATAGAATAGTGGACGAGACTGTTATTAGCAGACTTCCAAGGAGCTTATCCAGGGACAAAGATGCATAA 1953 0.4398 MSCGEENKEGGEEGELKQTGTDKSAEVGVCHGKHSITQNGSIPVPRFNIDNKLLIDPKLLYVGMKIGEGAHGKVYEGRCGDQIVAIKVLNCGNTPEERAALEGRFAREVTMMSRVKHENLVKFIGACKDPHMVIATELLPGMSLRKYLISIRPKQLDLHLAIGFALDIARAMECLHANGIIHRDLKPDNLLLTENQKSVKLVDFGLAREESVTEMMTAETGTYRWMAPEQLNVAVQLYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQVRPSLPEDISPDLAFIVQSCWVEDANVRPSFSQIVRLLNTFLFTLLPPSLPLTESDTIKAAVSSSDSIITESSARARGKFSFLRQLFAARRTRNTMNGLVAVNVEQRNRGEQALIRSCKAYESLLMDKSQDPCNLEASGDDHCSSSSSSSSSTSSAYRLFDRQRSIYQIMGGGKAADVILWKQGHVSFGIIVVATIAWILFERSGLSFLSISSDVLLVLIVIQFLRANYAVLRNKQLRPLPELELSEEMVNNSAASFRVKINYMLLMAHDITLGKDFRLFFKVVVCLWLLSVIGSFFSFFTLAYVGTIMSITVPALYNKYEEHVDRYAGLVHKKFSKHYRIVDETVISRLPRSLSRDKDA* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02341 650 MobiDBLite consensus disorder prediction 1 20 - -
Eupl05g02341 650 CDD STKc_MAP3K-like 66 325 - -
Eupl05g02341 650 ProSiteProfiles Reticulon domain profile. 465 650 IPR003388 -
Eupl05g02341 650 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 63 331 - -
Eupl05g02341 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Eupl05g02341 650 SUPERFAMILY Protein kinase-like (PK-like) 57 347 IPR011009 -
Eupl05g02341 650 Gene3D Phosphorylase Kinase; domain 1 48 139 - -
Eupl05g02341 650 SMART serkin_6 60 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g02341 650 FunFam Kinase suppressor of Ras 1 49 139 - -
Eupl05g02341 650 Gene3D Transferase(Phosphotransferase) domain 1 143 337 - -
Eupl05g02341 650 Pfam Protein tyrosine and serine/threonine kinase 62 328 IPR001245 GO:0004672|GO:0006468
Eupl05g02341 650 Pfam Reticulon 466 619 IPR003388 -
Eupl05g02341 650 ProSiteProfiles Protein kinase domain profile. 60 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g02341 650 ProSitePatterns Protein kinases ATP-binding region signature. 66 87 IPR017441 GO:0005524
Eupl05g02341 650 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02341 Eupl-Chr5 50593782 50615451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02341 49 385 MAP Kinase Kinase Kinase AT5G01850 70.083 5.22e-172 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Eupl05g02341 PK_Tyr_Ser-Thr 2.3e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02341 - - tss:122654353 590.882