Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02330 ATGTACAAGCCACGGTTAGGCGAATGTGTCAACAGGGCCGAGACGGAATATGGGTATGTCGAAACCAATCCATCGGGTCGTTATGGACGTTTCAAAGAAATTCTCGGAAAAGGAGCGACGAAGACTGTGTACAAGGCATTTGACGAGGTCCTTGGAATGGAGGTGGCATGGAGCCAGGTGAAGCTCAACAATGTGCTCCGATCGCCAGAGGAGTTGCAGCGGCTGTACTCTGAGGTGCACCTCCTCAGCACCCTCGATCACGACTCCATCATCCGATTCTACACCTCTTGGATTGACGTCGATCGGAGAACCTTCAATTTCATCACAGAAATGTTTACTTCCGGCACCCTCAGAGAGTACCGACAGATGCACAATCGAGTAGACATCAGAGCCGTCAAGAACTGGGCCCGTCAAATCCTACATGGACTCGTTTATCTGCATGGTCACGATCCACCGGTGATCCATAGAGACCTCAAGTGTGATAACATCTTCGTCAATGGCCATCTAGGACAAGTCAAGATCGGTGATCTAGGGCTAGCAGCCATTCTCCGTGGCTCCCAGGCGCACAGTGTTATAGGCACGCCGGAGTTCATGGCGCCGGAACTGTATGAAGAAAAATACAACGAGCTCGTGGACATCTACTCCTTCGGCATGTGTGTGTTGGAGATGCTTACTTCACAATACCCTTACAACGAGTGCTCCAACCCGGCACAAATCTACAAGAAAGTGACATCAGGAAAACTGCCCGACGCATATTACCGAATTCATGACTTAGAAGCCCGACGATTTATCGGGAAATGTTTAGAGACGGCTTCAAAGAGATTGCCCGCCAAGGAGCTGTTGCTCGACCCGTTCCTCGCGTCTAAAGAAGGGGAGCTGTTGCGTGTGCCAACGATGGTAAGTCATAAGCCAAATCCCAACGAAGAGAGGCTGATGTACTCTTCATTACCGGCTGATACAAAAAGGAGAACTGACATGACTATCACGGGGAAGATGAATCCGGAAGACGATACTATCTATCTTAAAGTACAGTTTGCTGATAAAGATGGTTGTGTTAGGAACGTATATTTTCCGTTTGACATATTAAGCGACACGCCGATTGATGTTGCAACTGAGATGGTTAAGGAGTTGGAGATCAACGATCGGGAGCCCTTCGAGATCGCAGAGGTGATCCAAGAGGAGATTTCGGGTCTAGTCCCACATTGGAAGGAATGGGAATCACCCCAAAACCAATCCCACCACAGCTTTAGCTATCAAGAAGACGACGATGACAATGGGCCTCGCCATCCTTTCCACTATTTCTCCTCCTGTTCTTCCTCCCAAGCTTCGCTTCCTGGCTTGATTCCTTCACGTGGGACCCACTTTCCCCATGAGGACGACATCACTTGTGGCCTTGATTGGCTTCCAGATGAGTTGTTGGTTGACGATGACACTAACTCACAAAGCTCCGACAAATATTCCAACTTGAATTACAACTCCGACAATGAACATAACATAGACCTAAGCCCCAGAAGAAGAGAACAACGTCACAACGTCTGGAAGACCCAAAAGTGTACGAGGTTCAGTTGCCAAGAAGACAACCCAAAAACCAGCCACCCCGCGGGTACAAAGTGGTACAAGCAATGCAACGCAGAGGGAGCTTCTAGCTCCAATCATGAGCGAAGAATGATACAGAACCGTCAATTAAGAAGGATCGGATCGCTAGTGGATTTACGAAGTCAGTTGTTACACCGGTCCTTGGTTGAAGAGGTGACAAAGCGTCGGTTGTTCAAGACAGTTGGAGCCGTGGAGGACATCGGATATCAGGTGCCATGCGAGTTTTCTGCAGGCAAGGCATCGGCAGTGATGAGTGGTGGTTGTAAAGTGACTGTGAGAGACCCAAAAGGTGGTAAGAAGAGATGA 1902 0.4895 MYKPRLGECVNRAETEYGYVETNPSGRYGRFKEILGKGATKTVYKAFDEVLGMEVAWSQVKLNNVLRSPEELQRLYSEVHLLSTLDHDSIIRFYTSWIDVDRRTFNFITEMFTSGTLREYRQMHNRVDIRAVKNWARQILHGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQAHSVIGTPEFMAPELYEEKYNELVDIYSFGMCVLEMLTSQYPYNECSNPAQIYKKVTSGKLPDAYYRIHDLEARRFIGKCLETASKRLPAKELLLDPFLASKEGELLRVPTMVSHKPNPNEERLMYSSLPADTKRRTDMTITGKMNPEDDTIYLKVQFADKDGCVRNVYFPFDILSDTPIDVATEMVKELEINDREPFEIAEVIQEEISGLVPHWKEWESPQNQSHHSFSYQEDDDDNGPRHPFHYFSSCSSSQASLPGLIPSRGTHFPHEDDITCGLDWLPDELLVDDDTNSQSSDKYSNLNYNSDNEHNIDLSPRRREQRHNVWKTQKCTRFSCQEDNPKTSHPAGTKWYKQCNAEGASSSNHERRMIQNRQLRRIGSLVDLRSQLLHRSLVEEVTKRRLFKTVGAVEDIGYQVPCEFSAGKASAVMSGGCKVTVRDPKGGKKR* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02330 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Eupl05g02330 633 MobiDBLite consensus disorder prediction 476 497 - -
Eupl05g02330 633 ProSiteProfiles Protein kinase domain profile. 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g02330 633 CDD STKc_WNK 27 286 - -
Eupl05g02330 633 MobiDBLite consensus disorder prediction 476 499 - -
Eupl05g02330 633 MobiDBLite consensus disorder prediction 410 432 - -
Eupl05g02330 633 SUPERFAMILY Protein kinase-like (PK-like) 31 287 IPR011009 -
Eupl05g02330 633 FunFam probable serine/threonine-protein kinase WNK9 112 291 - -
Eupl05g02330 633 Gene3D Transferase(Phosphotransferase) domain 1 112 293 - -
Eupl05g02330 633 SMART serkin_6 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g02330 633 FunFam Probable serine/threonine-protein kinase WNK1 13 110 - -
Eupl05g02330 633 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g02330 633 Gene3D Phosphorylase Kinase; domain 1 12 110 - -
Eupl05g02330 633 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 14 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02330 Eupl-Chr5 50419452 50426730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02330 8 426 MAP Kinase Kinase Kinase AT3G51630 69.953 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Eupl05g02330 Pkinase 7.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02330 K08867 - msin:131223815 848.966