Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02328 ATGGGTAATCAGAGGTTTAGGTTATCAGATATGATGCCAAATGTTTGGTTTTACAAGCTGAAGGATATGAGCAGAAGCAGAAACCATAATACCTCTCAGCAGCCAATTAAGAAAAAACACCCAACAGCAGCAACACCAAAGCATTTCTCCCACCCCAGACATTCTTTCTACTTCACCTCAGAACCCTTCAAAGCAGATAGACTTCACAATTCTCCCATCAACCCAAAAGCCTCAGACACCCATTTCCCTGACCCACCAAGAAAATCATCCAAGAGATCCAAGAGGAAAGCCGTTAGATCTTCTTCTAAGCTTGTCTCCTCCTCTGTCTCCGCTGGTTGCAGCTGTCGAGCCACTCTCGACTCTGTCTGGACTAATTCCAATTCTACACCCGATTACTCTGCTTCTCCTTTTGAGTCTTCCCCTGACCCACCTGAATTTGGGTTCGACGGCTCCATCGCCGCAACTCACCCGTTCAACGGTTATGCCTCATTTTCTGGTTCTTGCAGTTGTAGACTCAGTTCTTCCGGTACCGATTTTATCATAGACGTGGATACAAAGAAATCTTCTGCTAGAAAATTCGAGAAGCTAGATGTCTTCGATTCTATTTCGGAGCTTGAACTCCCTCCAATTTTAACGAAGCCGGCAAAATTCAGCGATATGATCTCCGACATTAAGAAGAAAGAGACCCAACCTGCTAAATTTAGAAGAAGTTCAGCTAAATTGGAGGAGAGAAATGCTCATGGGTCTCTCTCTGTCAAGATTGTGAAGGAAGAAAGCGTCAGGACTCTCAAAGAACAGAAGACTAGTCATCCCCTCCGCAGGTCTTCACCAGGTTCTCCAGGATTGAAGCTCCGAGCAAATTCTCCGAGAATTGCCAGCAAGAAGATTCAGGCACATAGTCGGAAGATAGTGTCGTCCACTGCGAGCTCAAGATCATCAAGGAGGAAGAGCCTTTCGGACAGCTTCGCAGTCATGAAGTCCTCATTCGATCCTCAGAAAGATTTCAGGGATTCAATGGTGGAGATGATTGTGGAGAATAATATCCGGGCATCGAAGGACTTAGAAGAGCTTCTTGCTTGTTACCTTTCCTTAAATTCTAACGAGTATCACGACCTCATCGTCAAGGTGTTTGAGCAAATCTGGTTCAATCTGACTGATATTCGATCGTAA 1170 0.4504 MGNQRFRLSDMMPNVWFYKLKDMSRSRNHNTSQQPIKKKHPTAATPKHFSHPRHSFYFTSEPFKADRLHNSPINPKASDTHFPDPPRKSSKRSKRKAVRSSSKLVSSSVSAGCSCRATLDSVWTNSNSTPDYSASPFESSPDPPEFGFDGSIAATHPFNGYASFSGSCSCRLSSSGTDFIIDVDTKKSSARKFEKLDVFDSISELELPPILTKPAKFSDMISDIKKKETQPAKFRRSSAKLEERNAHGSLSVKIVKEESVRTLKEQKTSHPLRRSSPGSPGLKLRANSPRIASKKIQAHSRKIVSSTASSRSSRRKSLSDSFAVMKSSFDPQKDFRDSMVEMIVENNIRASKDLEELLACYLSLNSNEYHDLIVKVFEQIWFNLTDIRS* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02328 389 ProSiteProfiles OVATE domain profile. 324 383 IPR006458 -
Eupl05g02328 389 MobiDBLite consensus disorder prediction 67 103 - -
Eupl05g02328 389 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Eupl05g02328 389 MobiDBLite consensus disorder prediction 263 289 - -
Eupl05g02328 389 NCBIfam uncharacterized plant-specific domain TIGR01568 322 385 IPR006458 -
Eupl05g02328 389 Pfam Transcriptional repressor, ovate 328 384 IPR006458 -
Eupl05g02328 389 MobiDBLite consensus disorder prediction 26 51 - -
Eupl05g02328 389 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 55 384 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02328 Eupl-Chr5 50397342 50398736 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Eupl05g02328 Ovate 3.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02328 - - nnu:104594515 460.299