Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02319 ATGCCAGAGATCGAACAAGATTCCGGCAATGTCGTGCCGGAATCTGGGGAAATTTGGCCGGAAAACGCCTTATTTGGGAAATACGAGATCGGTAAGTTGCTTGGCTGCGGTGCCTTCGCGAAGGTCTACCACGCTAGGAACATTCATTCCGGACAGAGCGTCGCAATTAAATCCATCAGCAAGCAGAAAATCGTTAAAGGAGGATTGATCCCACACATCAAGCGGGAGATCTCTATCATGCGCCAGTTGCGTCACCCTCACATCGTCAAGCTCTTCGAAGTTCTCGCAACGAAGACCAAGATTTACTTCGTGATGGAATTCGTGAAAGGCGGTGAGCTCTTCGCTAAGGTCGCAAAGGGCCGTTTTAGCGAAGATCTCAGTCGTCGGTACTTTCAGCAGTTGATCTCTGCCGTCGGATACTGTCACTCCCATGGCGTGTTCCACCGAGATCTGAAACCAGAGAATCTCCTCCTCGACGAGAGCGGAGACCTCAAGGTTTCGGATTTCGGGCTGAGCGCCGTAACGGATCAGGTCGGAAACGACGGACTGTTACACACGCTTTGTGGTACGCCTGCGTATGTGGCGCCTGAAATCCTGGCGAAGAAAGGTTACGATGGTGCGAAGGTAGATATCTGGTCATGCGGCGTTATCCTCTACGTCCTGAACGCCGGTTATCTCCCCTTCAATGATCCCAATCTCATGGTAATGTATCGTAAAATCTACAAAGGAGAGTTTCGCTGCCCAAAATGGATGTCGCCCGATCTGCGACGATTCCTATCCCGCCTCCTCGACACGAATCCCGAGACAAGGATCACCGTTGATGAGATCCTCCGTGACCCTTGGTTCAAAAAGGGCTACAAAGAGATTAAATTCCATGACGATTATTTCGGTCTTAAAGCTGACAAAGAAGACCGAAACGCTACGTTCTTGAACGCGTTTGATATAATATCGTTCTCTTCGGGTTTTGATTTATCGGGTATGTTTGATTCCGGTAACTCAGTGGATAACGAAAGATTCATCTCAGACGAGTCACCGGAGAAAATTATCGAGAAAATCGAGGAGGTCGCGAAGAGAGAGAGCGTAAAGGTGAGGAGAAAGGAATGGAAACTAGTGTTGGAAGGGCAAAACGGTAATTCACTTGTCGGAGTCGATGTTTACCGGTTAACGGAGAAGTTGGTTGTAGTGGAGGTACGGTCCTACGAGAGGAATTGGAGGAATAAGCTCAATCAGGAGCTGAATAGCATTATTTATCACCCGGAATCGCTGGTTCCGGGTAATTAA 1281 0.4879 MPEIEQDSGNVVPESGEIWPENALFGKYEIGKLLGCGAFAKVYHARNIHSGQSVAIKSISKQKIVKGGLIPHIKREISIMRQLRHPHIVKLFEVLATKTKIYFVMEFVKGGELFAKVAKGRFSEDLSRRYFQQLISAVGYCHSHGVFHRDLKPENLLLDESGDLKVSDFGLSAVTDQVGNDGLLHTLCGTPAYVAPEILAKKGYDGAKVDIWSCGVILYVLNAGYLPFNDPNLMVMYRKIYKGEFRCPKWMSPDLRRFLSRLLDTNPETRITVDEILRDPWFKKGYKEIKFHDDYFGLKADKEDRNATFLNAFDIISFSSGFDLSGMFDSGNSVDNERFISDESPEKIIEKIEEVAKRESVKVRRKEWKLVLEGQNGNSLVGVDVYRLTEKLVVVEVRSYERNWRNKLNQELNSIIYHPESLVPGN* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02319 426 Pfam NAF domain 308 364 IPR004041 GO:0007165
Eupl05g02319 426 Gene3D Kinase associated domain 1, KA1 311 418 - -
Eupl05g02319 426 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Eupl05g02319 426 FunFam Non-specific serine/threonine protein kinase 20 312 - -
Eupl05g02319 426 CDD CIPK_C 311 413 - -
Eupl05g02319 426 FunFam Non-specific serine/threonine protein kinase 20 107 - -
Eupl05g02319 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Eupl05g02319 426 SMART serkin_6 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g02319 426 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 21 399 - -
Eupl05g02319 426 SUPERFAMILY Protein kinase-like (PK-like) 25 291 IPR011009 -
Eupl05g02319 426 Gene3D Transferase(Phosphotransferase) domain 1 20 310 - -
Eupl05g02319 426 ProSitePatterns Protein kinases ATP-binding region signature. 34 57 IPR017441 GO:0005524
Eupl05g02319 426 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g02319 426 ProSiteProfiles Protein kinase domain profile. 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02319 Eupl-Chr5 50257907 50259978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02319 1 412 CBL-interacting serine-threonine protein kinases AT2G30360 62.383 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Eupl05g02319 Pkinase 5.8e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02319 - - nnu:104594527 627.476