Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl05g02306 | ATGTCCAGAGACAGAGACATATTTGATGAGATAGGCAAGAAGGTTAATAGAGAAGCCGATGCTTCTGATCGAATGAGAAGGAGAGACTTATTAGGCCCACCTGGGACCTTAAACACCATTACACCTTGTGCTGCGTGTAAGCTTCTAAGACGACGGTGTGCGCAAGAATGCCCTTTCTCTCCATATTTCTCTCCTCACGAACCCCAGAAATTTGCTTCTGTCCACAAAGTCTTTGGTGCAAGCAACGTCTCGAAGATGCTAATGGTACCAACTCTTTCTCTAATCTTCTATCCTTATTCCCTTATTAATTACCATCTTTTAATCGACCAGGAGGTGCCGGAGAGCCAAAGAGCTGATGCGGCAAATAGCCTTGTTTATGAAGCAAACGTGAGGATCGGGGATCCAGTATATGGGTGCATGGGTGCAATTTCAGCCTTGCAACAACAAGTCCAATCCTTGCAAGCCGAGCTCAACGCAGTAAGAGCTGAGATACAGTACAGGTATAGGGAAATTATCATTCCTCCATCTCATGCCGCTTTGCTTTCTCCCGGGACGGTGTCGGTTGCTGCATCGCGGCCACCACCCCCTCCTCCGCCTCCTCCTCCTCCTCGTCCTCCTTCATCTTCCATGTATACGCTGCATTCGAGCTCAACCGATTATATTGCGAATGAGAATATCACGTATTTTGTCTAA | 693 | 0.4733 | MSRDRDIFDEIGKKVNREADASDRMRRRDLLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMVPTLSLIFYPYSLINYHLLIDQEVPESQRADAANSLVYEANVRIGDPVYGCMGAISALQQQVQSLQAELNAVRAEIQYRYREIIIPPSHAALLSPGTVSVAASRPPPPPPPPPPPRPPSSSMYTLHSSSTDYIANENITYFV* | 231 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl05g02306 | 230 | Pfam | Lateral organ boundaries (LOB) domain | 42 | 87 | IPR004883 | - | |
Eupl05g02306 | 230 | Pfam | Lateral organ boundaries (LOB) domain | 110 | 161 | IPR004883 | - | |
Eupl05g02306 | 230 | ProSiteProfiles | LOB domain profile. | 41 | 164 | IPR004883 | - | |
Eupl05g02306 | 230 | Coils | Coil | 143 | 163 | - | - | |
Eupl05g02306 | 230 | MobiDBLite | consensus disorder prediction | 189 | 208 | - | - | |
Eupl05g02306 | 230 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 38 | 201 | - | - | |
Eupl05g02306 | 230 | MobiDBLite | consensus disorder prediction | 184 | 213 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl05g02306 | Eupl-Chr5 | 50077179 | 50078168 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl05g02306 | 27 | 188 | AS2 family | AT2G40470 | 69.822 | 9.01e-64 | 195 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Eupl05g02306 | LOB | 3.7e-15 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl05g02306 | - | - | vvi:100251929 | 283.493 |