Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02299 ATGGCGAGCTCTACCGACTCCTCTGATCAGAAATACCGTCAATACCATCCTTACCAAGACCTCCATGTCCCGATTCACAACCTCTATAATCTCCCGACCTCACCCGAATATCTCTTCCAAGAAGAGGCTGTCGTTCAGCGACGATCGTGGGGCGAGAATTTACAGTACTATACCGGCTCTGGGTACATAACCGGCGCCATCGTTGGAGCCGCTAAGGGTTCTGCCGAAGGTCTCAAAGCTGCCGAACCCGGAGATACATTAAAGTTACGGATTAATCGGGTCTTGAATTCTGGGGGGCAGACTGGAAGAAGGTTTGGGAATTCATTGGGTATTGTGGGATTGATCTTCGCGGGACTAGAGAGCGGGATTATACACATGAGGGGGGCGGATGATTTGTTGAACAGCGTTTTAGCTGGGTTGGGCACGGGAGCGCTCTACAAGGCAGCATCTGGGCCTCGCTCTGCTGCCGTTGCTGGTGCCATCGGAGGGCTAGCTGCAGGTGTTGCTGTTGCAGGCAAGCAGGCGATCAAAAGATACGTGCCTATTTGA 549 0.5282 MASSTDSSDQKYRQYHPYQDLHVPIHNLYNLPTSPEYLFQEEAVVQRRSWGENLQYYTGSGYITGAIVGAAKGSAEGLKAAEPGDTLKLRINRVLNSGGQTGRRFGNSLGIVGLIFAGLESGIIHMRGADDLLNSVLAGLGTGALYKAASGPRSAAVAGAIGGLAAGVAVAGKQAIKRYVPI* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02299 182 PANTHER TIM23 24 170 IPR045238 GO:0022857
Eupl05g02299 182 Pfam Tim17/Tim22/Tim23/Pmp24 family 56 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02299 Eupl-Chr5 49937280 49938440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02299 3 178 Chloroplast and Mitochondria Gene Families AT1G17530 60.674 9.15e-67 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02299 K17794 - ming:122071714 295.434