LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl05g02292	ATGACGAAATCTTGGCCTCCGGAGAGATTTTCTTCGGATTTGATGATGGGTGGAGTTGCAGCGGCGATATCGAAGAGTGCAGCAGCGCCGATCGAGAGGGTGAAGCTCTTGTTGCAGAATCAAGGAGAGATGTTGAAGAGAGGACAACTCAAGAGGCCTTATAAAGGTATTGGGGATTGCTTTAGGAGGGTCTTAAGGGAGGAAGGTGTGTTGTCTTTCTGGAGAGGAAATCAGGCCAATGTCATTCGGTACTTCCCCACCCAGGCTTTCAACTTCGCATTCAAGGGTTACTTCCAGAGCCTCTTTGGGCGCTCAAAAGAGAAAGATGGGTATGTGAAGTGGTTAGCTGGAAATGTAGCTTCCGGTAGTGCTGCTGGAGCAACTACTTCCTTGTTTCTATATCACTTGGATTATGCACGTACCCGACTAGGCACTGATGCAAAGGAATGCCCAATAAATGGTCAACGCCAGTTTAAAGGGATACTTGATGTTTACAGGAAGACATTGTCAAGTGACGGGTTCATAGGTCTGTATCGGGGATTTGGAGTTTCAATCATGGGGATTACTCTGTACCGGGGTATGTATTTTGGAATCTATGACACCATGAAGCCCATTGTTCTGGTGGGGCCATTTGAGGGGAACTTTTTTGCCAGTTTCGTGTTGGGTTGGAGTGTTACAACAGTTTCTGGGGTCTGTGCATACCCCTTTGACACACTGCGGCGTAGAATGATGTTGACTTCTGGACAGCCCTCCAAGTATCAGAACACCCTGCACGCCTGCAGGCAGATCATTCGCCAGGAGGGTTTCGGTGCACTGTACAGAGGAGTGACTGCGAACATGCTTCTGGGTATGGCAGGGGCTGGAGTCTTGGCAGGATACGATCAGCTGCACCGTATCGCATACAGGTACGGGTACAGTGTTGAACCGCAGCGGCGAGCCTTGAAGTGA	948	0.4947	MTKSWPPERFSSDLMMGGVAAAISKSAAAPIERVKLLLQNQGEMLKRGQLKRPYKGIGDCFRRVLREEGVLSFWRGNQANVIRYFPTQAFNFAFKGYFQSLFGRSKEKDGYVKWLAGNVASGSAAGATTSLFLYHLDYARTRLGTDAKECPINGQRQFKGILDVYRKTLSSDGFIGLYRGFGVSIMGITLYRGMYFGIYDTMKPIVLVGPFEGNFFASFVLGWSVTTVSGVCAYPFDTLRRRMMLTSGQPSKYQNTLHACRQIIRQEGFGALYRGVTANMLLGMAGAGVLAGYDQLHRIAYRYGYSVEPQRRALK*	316

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl05g02292	315	Gene3D	Mitochondrial carrier domain	12	304	IPR023395	-
	Eupl05g02292	315	PANTHER	ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED	7	305	IPR002113	GO:0005471\|GO:0005743\|GO:0140021\|GO:1990544
	Eupl05g02292	315	PRINTS	Adenine nucleotide translocator signature	54	75	IPR002113	GO:0005471\|GO:0005743\|GO:0140021\|GO:1990544
	Eupl05g02292	315	PRINTS	Adenine nucleotide translocator signature	113	126	IPR002113	GO:0005471\|GO:0005743\|GO:0140021\|GO:1990544
	Eupl05g02292	315	PRINTS	Adenine nucleotide translocator signature	10	22	IPR002113	GO:0005471\|GO:0005743\|GO:0140021\|GO:1990544
	Eupl05g02292	315	PRINTS	Adenine nucleotide translocator signature	87	99	IPR002113	GO:0005471\|GO:0005743\|GO:0140021\|GO:1990544
	Eupl05g02292	315	PRINTS	Adenine nucleotide translocator signature	218	234	IPR002113	GO:0005471\|GO:0005743\|GO:0140021\|GO:1990544
	Eupl05g02292	315	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	213	299	IPR018108	-
	Eupl05g02292	315	FunFam	ADP,ATP carrier protein ER-ANT1	11	305	-	-
	Eupl05g02292	315	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	8	101	IPR018108	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl05g02292	Eupl-Chr5	49861769	49868701	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl05g02292	8	303	Antiporters	AT5G17400	81.419	9.72e-179	494

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl05g02292	K05863		-	nnu:104603816	526.939

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