Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02268 ATGGAATTTCCAGGAACCCACCAGCAAACTGATTTCTCAGCTGGGAAGAACAGTGTCAAGTCCGAATTTGCTCCATTAGAAAGCTTTTCACCTGAGATTGCCACTCTACAAGTTAACACCCAAAGCAATGGTGGATTACAATCCGAGTATAACCAATACTCTCACCCTCCTCAATCTCTCAGAGAACAGAGAAGATCAGATGATGGGTACAATTGGAGAAAATATGGACAGAAACAGGTGAAAGGAAGCGAAAACCCACGCAGTTATTACAAGTGCACTTTTCCAAGTTGCCCAACTAAGAAGAAGGTGGAGAGGTCTTTAGATGGTCAGATTACTGAGATTGTGTACAAGGGTAGCCACAACCACCCAAAGCCTCAGTCGACTAGAAGATCATCAGCTTCTTCTCAACCAATTCAAGCTTCTGTAGCCCCATCTTCCGAAGTCTCCGATCACTTCACGACACATCAGACCACACAAATGGACTCTGTTACGACACCAGAGAATTCTTCGATCTCGATTGGGGACGACGATTTCGATCAAAGCTCTCAGAGGAGTAAATCAGGTGGTGATGAGTTTGACGAAGATGAACCTGAGACCAAAAGATGGAAAAAAGAGAATGAAAATGAGGGTATCTCAGCTTCTGGAAGTAGAACTGTGAGGGAACCTAGAGTTGTAGTTCAAACAACCAGTGATATTGATATTCTTGATGATGGATATAGATGGAGGAAATATGGGCAGAAAGTAGTAAAGGGGAATCCCAACCCAAGGAGTTACTACAAATGTACAAATGCGGGATGTCCGGTGCGAAAGCATGTCGAGAGAGCTTCCCATGATCTGAGAGCGGTGATCACAACGTACGAGGGGAAACACAACCACGATGTCCCTGCCGCTCGTGGTAGTGGCAGTCATAATGTCAATAGGCCCTTGCCTGATAACAACAACAATGTAAGCATGACTATAAGGTCTTCAGCCACGAATCAATCTAACCACAACACAGGCAATACTCTTCGCAATGTTAGAATACCTTCATCTGAAGGACAAGCACCCTTTACACTAGAGATGTTGCAGAGCCCGGGGGGATTTGGATTCTCGGGATTTGGTAACTCCATGGGCTCCTACATGAATCAACCACAACAAACAGAGAATGCGTTCCCGAAAACAAAAGAAGAACCAAGGGAGGACCTGTTTCTCGAGTCATTTCTATATTGA 1209 0.4467 MEFPGTHQQTDFSAGKNSVKSEFAPLESFSPEIATLQVNTQSNGGLQSEYNQYSHPPQSLREQRRSDDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVERSLDGQITEIVYKGSHNHPKPQSTRRSSASSQPIQASVAPSSEVSDHFTTHQTTQMDSVTTPENSSISIGDDDFDQSSQRSKSGGDEFDEDEPETKRWKKENENEGISASGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHNVNRPLPDNNNNVSMTIRSSATNQSNHNTGNTLRNVRIPSSEGQAPFTLEMLQSPGGFGFSGFGNSMGSYMNQPQQTENAFPKTKEEPREDLFLESFLY* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02268 402 ProSiteProfiles WRKY domain profile. 230 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl05g02268 402 ProSiteProfiles WRKY domain profile. 61 125 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl05g02268 402 Gene3D WRKY domain 54 126 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl05g02268 402 SUPERFAMILY WRKY DNA-binding domain 62 125 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl05g02268 402 FunFam WRKY transcription factor 54 126 - -
Eupl05g02268 402 MobiDBLite consensus disorder prediction 39 59 - -
Eupl05g02268 402 FunFam WRKY transcription factor 33 222 288 - -
Eupl05g02268 402 SUPERFAMILY WRKY DNA-binding domain 227 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl05g02268 402 SMART WRKY_cls 235 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl05g02268 402 SMART WRKY_cls 66 124 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl05g02268 402 Pfam WRKY DNA -binding domain 236 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl05g02268 402 Pfam WRKY DNA -binding domain 67 123 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl05g02268 402 Gene3D WRKY domain 222 288 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl05g02268 402 MobiDBLite consensus disorder prediction 39 222 - -
Eupl05g02268 402 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 40 331 IPR044810 GO:0003700
Eupl05g02268 402 MobiDBLite consensus disorder prediction 291 312 - -
Eupl05g02268 402 MobiDBLite consensus disorder prediction 121 178 - -
Eupl05g02268 402 MobiDBLite consensus disorder prediction 60 74 - -
Eupl05g02268 402 MobiDBLite consensus disorder prediction 179 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02268 Eupl-Chr5 49487054 49489397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02268 61 401 WRKY Transcription Factor Family AT2G38470 58.496 5.19e-119 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl05g02268 WRKY 2.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02268 K13424 - tcc:18591046 617.076