Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02263 ATGGGAGCTTGTTGTAGTAAGATGTCTGAGGGATTCATGGAGGATGAAGAAGAATACCAGGATGATGAGGATGATCATACATATCAGGGAGATTGTGGAGCGCGTGTGAGGCTACAAGGGTCTTGTAAATTTGCATCCATGTTCACCCAACAAGGAAGGAAAGGAATTAATCAAGATGCCATGACCATATGGGAGGACTTCATCGGCAAAAAAGATACGATCTTCTGTGGTGTATTCGATGGTCATGGTCCCTCAGGTCACAAGGTCGCAAGCCACATACGGGATGTTTTACCATCAAAACTCTCCTCAGGATTCAAACAAGCGAAACTCGGCGTTCATAATGATGTTGATTTTGATAACAATGATGATGATGGAAATGGTAGTGAGGATAGCCATGAAATTGATGGAAGTGATCATGCACCCTTTGCTTCATGGAAAGACACTTTTATTAAGGCCTTCGAGGAGATGGATAAAGAACTCAGTCTTGATTCCACCATTGATTCATTTTGTAGTGGTACCACAGCAGTAACCATACTTAAACAGGGGGAGAACTTGATAATTGCCAACTTGGGGGATTCTCGAGCAATTCTTTGTACTAGAGACAACAAAAACCAGCCCGTTCCCGTCCAACTCACAGTTGACCTAAAACCAAATCTTCCAAGTGAAGCTGAAAGGATTAAGAGATGTAAAGGAAGAGTTTTCGCTATGAAGGAAGAACCAGGTGTGTATAGATTGTGGATGCCTGATGACGATTGTCCTGGCCTCGCAATGGCGAGGGCCTTTGGCGATTTCTGCCTGAAAGATTTTGGCCTAATCTCTATCCCTCGAGTTTCTTATAAAAAACTTAGCAGCAATGATGAATTTGTGGTCCTAGCAACTGATGGGGTATGGGATGTGTTGACAAACAAGGAGGTGGTAAATATAGTTGCCTCAGCAAGGAAGCGATCCATGGCAGCTAGGTTGTTGGTGGACCGAGCTGTCCGAGCCTGGAAATGTAAATATCCTTGTTCAAAGGTTGATGATTGTGCAGTCATATGTCTTTACCTGAAAACAAAAACCATGTCATATGCAAAGGAAGACGGTATGAATCACCGGAAAACTACATGTTCTGACAGTTCCAACACAATAAGAAACTGCGGAAGCCATGACACTGCAGAGCCTGCATCAGCCGACGACGTAAAGGAGGAGTGGACTGCTCTTGAAGGTGTGAGTAGAGTGAACACTGTGCTGAAGCTTCCTCGGTTTGGTAGTACTGTTAATACTTGCCAAGAGAGATCAATGAAGGATGAAGAAGATTTGTGTTGA 1305 0.4368 MGACCSKMSEGFMEDEEEYQDDEDDHTYQGDCGARVRLQGSCKFASMFTQQGRKGINQDAMTIWEDFIGKKDTIFCGVFDGHGPSGHKVASHIRDVLPSKLSSGFKQAKLGVHNDVDFDNNDDDGNGSEDSHEIDGSDHAPFASWKDTFIKAFEEMDKELSLDSTIDSFCSGTTAVTILKQGENLIIANLGDSRAILCTRDNKNQPVPVQLTVDLKPNLPSEAERIKRCKGRVFAMKEEPGVYRLWMPDDDCPGLAMARAFGDFCLKDFGLISIPRVSYKKLSSNDEFVVLATDGVWDVLTNKEVVNIVASARKRSMAARLLVDRAVRAWKCKYPCSKVDDCAVICLYLKTKTMSYAKEDGMNHRKTTCSDSSNTIRNCGSHDTAEPASADDVKEEWTALEGVSRVNTVLKLPRFGSTVNTCQERSMKDEEDLC* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02263 434 PANTHER PROTEIN PHOSPHATASE 27 348 IPR015655 GO:0004722|GO:0006470
Eupl05g02263 434 Pfam Protein phosphatase 2C 109 328 IPR001932 -
Eupl05g02263 434 SUPERFAMILY PP2C-like 41 350 IPR036457 -
Eupl05g02263 434 CDD PP2Cc 44 349 IPR001932 -
Eupl05g02263 434 Gene3D - 39 352 IPR036457 -
Eupl05g02263 434 ProSiteProfiles PPM-type phosphatase domain profile. 44 349 IPR001932 -
Eupl05g02263 434 SMART PP2C_4 33 347 IPR001932 -
Eupl05g02263 434 MobiDBLite consensus disorder prediction 116 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02263 Eupl-Chr5 49445527 49449914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02263 1 378 PP2C-type Phosphatase Gene Family AT5G01700 53.665 2.65e-133 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02263 - - pda:103708864 508.834