Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02249 ATGGCTATGGAGAATCAAAATCAGATATTGAATGGGTTGTACAGATACCTGTTTCAGCTTCTTCAAATCCAGTTCCAGAACAAGTTCAAGTTCATCCTCTGTAAGCACCTGTTCTTGCTTCTTCAACTACTGGTCTTTGCCTTCCAACCCGTCTCGAGCCAGTTGTGGGATGGGATTATCGTCACGCAAGCAGACTATCAAGCTCTTCAAGCCTTCAAACATGATTTAATTGATTCTAAAGGGGCCATGCGGAGCTGGAACGACAGTGGTTATGGAGCTTGTTCGGGTCGGTGGATAGGGATCAAGTGCGTTAAAGGTCAGGTTATTGCGATCCAGCTCCCCTGGAAAGGATTGGGCGGCCGAATATCAGAGAAGATCGGCCAACTGTCGGCGCTTCGGAAGCTCAGCCTCCACGACAATGTTATTGGAGGTATGGTCCCATCGTCTCTAGGATTCCTCCCAAATCTCAGAGGGGTTCATCTTTTCAACAACCGGCTTTCAGGTTCAATCCCTCCTTCGATCGGTTCCTGTCCTCTGCTTCAGACTCTTGATTTCAGTAACAACTCACTCGCTGGAACAATCCCCGCTAGTATCGCGAACTCTACTAAGCTTTACAGACTTAATCTTAGCTTCAATGCCCTCTCGGGTTCGATCCCAATCAGTCTCACTCACTCCCCTTCTCTCACTTTCCTCGCTCTCCACTACAACAACCTCTCTGGTTCTGTTCCTGACACTTGGGGTGGAAAAGAGGAGAAGAACATCTATCAGCTTCAGTCCTTGACCCTTGATCATAACCTCATCTCTGGAAGTGTTCCTGTTTCTCTAAGCAAGTTGGGTAAGCTTGAAGAGATTTCTCTGAGCCATAACCAGATCAATGGAACAATACCAGATGAAATTGGGTCGCTCTCGAGGCTCCGAACACTAGATTTCTCTAATAATGTCATTACTGGAAGCTTTCCTGCTAGTCTCTGCAACCTCTCCTTGCTGATTCGATTGGATCTCGAGAGCAACCACCTTGATAACCAAATCCCAGAAGCCATCAACGGACTACAAAATCTCTCGGTTCTTAACCTGAGGAGAAACCAATTCAAAGGCCAAATTCCAGAGACTCTCGGGAATATCTCCAGCCTCACCCAACTTGATCTATCCCAAAATGATCTCACCGGAGATATTCCAGATTCGCTCGCGAATCTACCCAATCTCAACTCCTTCAATGTGTCTTACAACAACCTTTCTGGTTCTGTTCCCTTACCCCTCTCGGAAAAATTCAATTCGAGCTCCTTTGTGGGGAACCTTCAGCTATGTGGGTACAGTATTTCAACCCCGTGTCCTTCTCGCCCACCTGTGTCACCCGCGACTCCGAAACGCCGTCACCACAAATTGAGCACCAAAGACATAATTCTCATAGCTGCTGGAGCCCTCCTTGCGGTTTTACTTTTACTATGTTGTATTATGCTCGGCTGTTTGATCAGGAGAAGGGCTACTTCAAAAGGGAAGGATGGTCAAACTGCCGGAAGGGCGGGCGAGAAGGGGGCAACTGCAATAGGGACTGATGTGGAAGCGAGCGGTGAGACCGGAGGGAAACTAGTCCACTTTGATGGGCCTCTGGTGTTTACAGCCGATGATCTGTTGTGTGCAACTGCAGAGATCATGGGGAAGAGCACTTACGGGACGACGTATAAGGCAACCTTGGAGGATGGAAGTGAAGTTGCAGTGAAGAGGTTGAGAGAGAAGATTGCAAAGAATCAGAGGGAGTTCGAAGTAGAGGTCAATGTGATTGGTAAGATTCGACACCGGAATCTCTTGGCTCTCAGGGCTTATTACTTGGGCCCCAAAGGAGAGAAGCTTCTTGTCTTTGATTTCATGCCCAAAGGGAGTCTTGCAGCTTTCCTCCATGCTCGAGGACCGGAGACCCCTGTTGATTGGCCAACAAGGATGAACATAGCCATGGGCACAGCACGTGGCCTGTGCTACCTTCATACCCATGAGAACATGGTACATGGGAACTTGACAGCCGGGAACATCCTACTCGATGAACACACAAATGCCAAGATCGCTGACTATGGCCTCTCTAGGCTCATGACTGCCGCCGCCAATTCCAATGTGATTGCAACTGCTGGTGCCCTCGGTTATCGAGCGCCTGAGCTCTCAAAGCTCAAGAAAGCGAGCACAAAGACTGACGTCTACAGTCTTGGGGTGATAATGTTGGAACTCCTAACAGGGAAATCCCCGGGCGATGACATGAACGGAGGGAATTTGCCTCAGTGGGTGGCATCAATCGTAAAGGAGGAGTGGACCAATGAAGTCTTCGACTTGGAGCTGATGAGGGATGCGTCCACCACAGGTGATGAGTTGCTCAACACATTGAAATTGGCTCTGCACTGTGTCGATCCCTCACCAGCAGCAAGGCCAGAAGTTCAACAAGTTCTCCAGCAACTGGAGGAGATTAAGCCAGAATTGGCTGCCAGCTCCAGTGGTGACGGTGCTGGTGTCCCCTCTACAAGTGATTAA 2511 0.4902 MAMENQNQILNGLYRYLFQLLQIQFQNKFKFILCKHLFLLLQLLVFAFQPVSSQLWDGIIVTQADYQALQAFKHDLIDSKGAMRSWNDSGYGACSGRWIGIKCVKGQVIAIQLPWKGLGGRISEKIGQLSALRKLSLHDNVIGGMVPSSLGFLPNLRGVHLFNNRLSGSIPPSIGSCPLLQTLDFSNNSLAGTIPASIANSTKLYRLNLSFNALSGSIPISLTHSPSLTFLALHYNNLSGSVPDTWGGKEEKNIYQLQSLTLDHNLISGSVPVSLSKLGKLEEISLSHNQINGTIPDEIGSLSRLRTLDFSNNVITGSFPASLCNLSLLIRLDLESNHLDNQIPEAINGLQNLSVLNLRRNQFKGQIPETLGNISSLTQLDLSQNDLTGDIPDSLANLPNLNSFNVSYNNLSGSVPLPLSEKFNSSSFVGNLQLCGYSISTPCPSRPPVSPATPKRRHHKLSTKDIILIAAGALLAVLLLLCCIMLGCLIRRRATSKGKDGQTAGRAGEKGATAIGTDVEASGETGGKLVHFDGPLVFTADDLLCATAEIMGKSTYGTTYKATLEDGSEVAVKRLREKIAKNQREFEVEVNVIGKIRHRNLLALRAYYLGPKGEKLLVFDFMPKGSLAAFLHARGPETPVDWPTRMNIAMGTARGLCYLHTHENMVHGNLTAGNILLDEHTNAKIADYGLSRLMTAAANSNVIATAGALGYRAPELSKLKKASTKTDVYSLGVIMLELLTGKSPGDDMNGGNLPQWVASIVKEEWTNEVFDLELMRDASTTGDELLNTLKLALHCVDPSPAARPEVQQVLQQLEEIKPELAASSSGDGAGVPSTSD* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02249 836 SUPERFAMILY Protein kinase-like (PK-like) 549 817 IPR011009 -
Eupl05g02249 836 Pfam Protein tyrosine and serine/threonine kinase 549 813 IPR001245 GO:0004672|GO:0006468
Eupl05g02249 836 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 63 216 - -
Eupl05g02249 836 FunFam Pollen receptor-like kinase 1 622 826 - -
Eupl05g02249 836 FunFam Leucine-rich repeat receptor-like protein kinase 530 621 - -
Eupl05g02249 836 ProSiteProfiles Leucine-rich repeat profile. 376 399 IPR001611 GO:0005515
Eupl05g02249 836 ProSiteProfiles Protein kinase domain profile. 545 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g02249 836 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 248 446 - -
Eupl05g02249 836 Pfam Leucine rich repeat 331 387 IPR001611 GO:0005515
Eupl05g02249 836 Gene3D Ribonuclease Inhibitor 319 444 IPR032675 -
Eupl05g02249 836 Gene3D Ribonuclease Inhibitor 62 219 IPR032675 -
Eupl05g02249 836 Gene3D Ribonuclease Inhibitor 220 318 IPR032675 -
Eupl05g02249 836 Pfam Leucine rich repeat N-terminal domain 64 103 IPR013210 -
Eupl05g02249 836 MobiDBLite consensus disorder prediction 817 836 - -
Eupl05g02249 836 SUPERFAMILY L domain-like 99 441 - -
Eupl05g02249 836 Gene3D Phosphorylase Kinase; domain 1 551 622 - -
Eupl05g02249 836 CDD STKc_IRAK 551 816 - -
Eupl05g02249 836 Gene3D Transferase(Phosphotransferase) domain 1 623 827 - -
Eupl05g02249 836 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 258 816 - -
Eupl05g02249 836 SMART LRR_typ_2 350 373 IPR003591 -
Eupl05g02249 836 SMART LRR_typ_2 278 302 IPR003591 -
Eupl05g02249 836 SMART LRR_typ_2 153 177 IPR003591 -
Eupl05g02249 836 SMART LRR_typ_2 254 277 IPR003591 -
Eupl05g02249 836 SMART LRR_typ_2 129 152 IPR003591 -
Eupl05g02249 836 SMART LRR_typ_2 374 398 IPR003591 -
Eupl05g02249 836 SMART LRR_typ_2 326 349 IPR003591 -
Eupl05g02249 836 SMART LRR_typ_2 226 248 IPR003591 -
Eupl05g02249 836 Pfam Leucine Rich Repeat 304 326 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02249 Eupl-Chr5 49279656 49282868 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02249 10 818 Receptor kinase-like Gene Family AT3G51740 65.610 0.0 1002
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Eupl05g02249 PK_Tyr_Ser-Thr 2.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02249 - - tss:122652751 1262.67