Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02240 ATGTCTTCGGATTATCCCGAGAGGAAGAGAAGATCGCGAAGTAGACGCAATGGGTCTAATTCTATAGCGGAGACTCTCGCGAAGTGGAAAGAGGTAAACAACGAACTTGATTGTTCCAACGATGGAGGTAAACGGATTCGTAAGGTCCCTGCAAAGGGTTCAAAGAAAGGTTGCATGAGAGGAAAGGGAGGACCTGAGAATTCGCACTGTAATTACAGAGGTGTGAGGCAAAGAACTTGGGGAAAGTGGGTTGCTGAAATTCGCGAACCAAACCGAGGGAGTCGGCTCTGGTTAGGTACCTTTTCAACCGCACTTGAAGCTGCTCTGGCTTACGATGAAGCTGCGAGAGCTATGTATGGCCCGGGTGCCCGTCTCAACCTTCCCCAATATTGTGAATCAAAGGAATCATCCAAGGAATCATATTCAACTGCTACCCCATCGACTTCTGAGTCGACCACGACGACAACATCGAACAATTCTGAGATATTCAAGTCAGAGGAACCCAAATTCAAGGTCGAGTACCCAATCGTCGAAAACGAAAACAGCAGAGGAGAGTTAAAAATCGACAAGAGGCCATCTTCTGATGCTACTGCCATGCCAATGAGTGTAGTGAAGTCGGAGGCGAATGAGGAAGAGCATGTGGGGTTTATAGATTCTGTTCCTTTTGGCAGAGTTGGAACCAAACAAGATAGCTTGCAGGATTTCTCCACGGATGAAATGTTTGATGTGGAAGAGCTTCTTCAGTCTATGGATACTGATCCCAATAATAGCACTGGATTAAGGCAGGACTGGAACTATGATTTGGGTCAAGTGGGGTTGTCCGACAGAGATCAATTGCATACTTTGCAGTGTGGGAGTCCATCAGATTTGTCATACCAGTTGCAGAACCCGGATGCAAAGCTGCTAGGGAGCTTGTACCACATGGAGGAGGCGCCGTCAGGTATGGATTACAGCTACGACTTCTTGAAGCCTGTGAGCCAGGAAGAGAAGTTCAGTTATGGATTGGATGAAGAGCAAGGATTGCTCGAATTGGGTTTCCCTGATTTGGGTTTTAATTAG 1059 0.4693 MSSDYPERKRRSRSRRNGSNSIAETLAKWKEVNNELDCSNDGGKRIRKVPAKGSKKGCMRGKGGPENSHCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFSTALEAALAYDEAARAMYGPGARLNLPQYCESKESSKESYSTATPSTSESTTTTTSNNSEIFKSEEPKFKVEYPIVENENSRGELKIDKRPSSDATAMPMSVVKSEANEEEHVGFIDSVPFGRVGTKQDSLQDFSTDEMFDVEELLQSMDTDPNNSTGLRQDWNYDLGQVGLSDRDQLHTLQCGSPSDLSYQLQNPDAKLLGSLYHMEEAPSGMDYSYDFLKPVSQEEKFSYGLDEEQGLLELGFPDLGFN* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02240 352 MobiDBLite consensus disorder prediction 137 164 - -
Eupl05g02240 352 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 7 324 - -
Eupl05g02240 352 PRINTS Ethylene responsive element binding protein signature 94 110 IPR001471 GO:0003700|GO:0006355
Eupl05g02240 352 PRINTS Ethylene responsive element binding protein signature 72 83 IPR001471 GO:0003700|GO:0006355
Eupl05g02240 352 SMART rav1_2 71 134 IPR001471 GO:0003700|GO:0006355
Eupl05g02240 352 ProSiteProfiles AP2/ERF domain profile. 71 128 IPR001471 GO:0003700|GO:0006355
Eupl05g02240 352 MobiDBLite consensus disorder prediction 1 22 - -
Eupl05g02240 352 CDD AP2 70 128 IPR001471 GO:0003700|GO:0006355
Eupl05g02240 352 SUPERFAMILY DNA-binding domain 71 129 IPR016177 GO:0003677
Eupl05g02240 352 Pfam AP2 domain 70 120 IPR001471 GO:0003700|GO:0006355
Eupl05g02240 352 Gene3D AP2/ERF domain 71 129 IPR036955 GO:0003700|GO:0006355
Eupl05g02240 352 FunFam Ethylene-responsive transcription factor 2 70 129 - -
Eupl05g02240 352 MobiDBLite consensus disorder prediction 137 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02240 Eupl-Chr5 49149927 49152115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02240 8 351 AP2-EREBP Transcription Factor Family AT2G40340 39.779 1.30e-66 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl05g02240 AP2 2.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02240 - K09286 nnu:104597267 357.836