Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02236 ATGTCGGAAAAAAGGAATTTAGTGAGAGGGTGTATTAAAACCAGCAAGGCACCATGGATAGTGAATCGAACCAAGAAAGATGGTGCCTTGGTTACTACATACCGGCATCCTACCCATAGAGAGCGTGAAAACAACAAGGAACGAGAGCGTCACCGCCGCACAATAGCTCGGAATATCTTTTCTGGTCTCCGAGTTCACGGAAATTATAGGTTACCCAAACATGCCGATAACAATGATGTGCTTAAAGCACTCTGCAAGGAAGCAGGATGGCATGTTGAAGATGATGGAACTGTTTATAAGAAGAAATCCTCGGAGGAGATGCCAAGTTCTTCAAAACAAGTTCAGAAATTAAGCCTCTTAATTACTATCAACCTCTTGTTGATACCATTGATCCAGTTGAAGATTATTGTACATGCAGCAATGAAGTCAACTCAGAAATAG 441 0.4172 MSEKRNLVRGCIKTSKAPWIVNRTKKDGALVTTYRHPTHRERENNKERERHRRTIARNIFSGLRVHGNYRLPKHADNNDVLKALCKEAGWHVEDDGTVYKKKSSEEMPSSSKQVQKLSLLITINLLLIPLIQLKIIVHAAMKSTQK* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02236 146 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 32 108 IPR033264 GO:0003700|GO:0006351|GO:0009742
Eupl05g02236 146 Pfam BES1/BZR1 plant transcription factor, N-terminal 34 114 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02236 Eupl-Chr5 49087595 49088651 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02236 28 118 BZR Transcription Factor Family AT3G50750 58.511 5.50e-21 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Eupl05g02236 BES1_N 7.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02236 - - tcc:18597461 147.902