Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02210 ATGTCGACGAAGGGGGAGGTGGTTTGCGTTACAGGCGGGAGCGGCTTCATCGGTTCATGGCTTGTCCGTCTCCTCCTCGACCGTGGCTACACCGTCCACGCCACCGTTAAAGATCTCAAGGATGAAAAAGAAACCAAGCATCTAGAGGCCCTGGAAGGAGCAGAGTCAGGTCTCCGTCTCTTCCAAATCGATCTCCTCGACTACGATTCTCTCGTCGCCGCGATCAGTGGCACTGTCGGCGTTTTCCATCTCGCTTCTCCCTGCATCGTCGATCAAGTCCAAGACCCCGAGAGGCAACTTTTGGAGCCGGCGATTCAAGGGACGATTAATGTGCTAAAAGCGGCGAAGGAGTGTGGGGTGAGGCGAGTGGTGGTGACGTCATCCGTATCAGCTATCACACCGAGCCCTAACTGGCCCGCCGAGGTTGCCAAACGGGAGGATTGCTGGACCGATCTCGAACACTGCAAGAAGAACGGGCTATGGTATCCAGTTTCTAAAACATTGGCAGAGAAAGCCGCGTGGGAATTTGCCAAGGACACAGGCTTGGACGTAGTTGTGATCAATCCTGGCACTGTAATGGGCCCTGTTCTCCCCCCTGCCGTCAATGCCAGCATGTTGATGCTCATACGTCTTCTTGAAGGTTGCAGTGAAGAGTATCTGAATTTTTATATGGGATCTGTCCATGTTAAAGATGTTGCCATAGCTCATATTCTGTTATATGAGAATCCTTCTGCATCAGGAAGGCACGTGTGTGTTGAAGCTATACGTCATTATAGTGACTTTGCAGCTAAAGTTGCAGAACTTTACCCTGAATACAAGGTTCCCAGGTTCCCAAAGGATACACAACCTGGATTATTGCGGGCGAAGGATGGATCAAAGAAGTTGATTGACTTGGGTCTCCAATTTACCTCCATGGAGCAAATCATCAAAGACGCTGTGGAGAGTTTAAAGAGCAAAGGATACATTTCTTGA 972 0.5021 MSTKGEVVCVTGGSGFIGSWLVRLLLDRGYTVHATVKDLKDEKETKHLEALEGAESGLRLFQIDLLDYDSLVAAISGTVGVFHLASPCIVDQVQDPERQLLEPAIQGTINVLKAAKECGVRRVVVTSSVSAITPSPNWPAEVAKREDCWTDLEHCKKNGLWYPVSKTLAEKAAWEFAKDTGLDVVVINPGTVMGPVLPPAVNASMLMLIRLLEGCSEEYLNFYMGSVHVKDVAIAHILLYENPSASGRHVCVEAIRHYSDFAAKVAELYPEYKVPRFPKDTQPGLLRAKDGSKKLIDLGLQFTSMEQIIKDAVESLKSKGYIS* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02210 323 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 313 - -
Eupl05g02210 323 CDD FR_SDR_e 8 300 - -
Eupl05g02210 323 Gene3D - 1 323 - -
Eupl05g02210 323 FunFam Cinnamoyl-CoA reductase 1 1 323 - -
Eupl05g02210 323 Pfam NAD dependent epimerase/dehydratase family 8 247 IPR001509 -
Eupl05g02210 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 316 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02210 Eupl-Chr5 48803983 48813614 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02210 1 323 Monolignol Biosynthesis Gene Families AT5G58490 71.827 0.0 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02210 - - ming:122060487 542.732