Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02206 ATGGCGACGAGCACGCCAAACTTAGAGTGCCGGATGTACGAAGCGAGGTACCCAGAAGTCGACATGGCGGTGATGATTCAAGTGAAGAACATTGCCGACATGGGTGCTTACGTTTCTCTGCTCGAGTACAACAACATAGAGGGTATGATTCTGTTCTCCGAGCTTTCTCGTCGTCGGATTCGGAGTGTCAGCAGTCTGATTAAGGTGGGCCGCCAAGAGCCTGTGATGGTCCTTAGGGTTGATAAAGAGAAGGGTTACATCGATCTCAGCAAGAGAAGGGTGTCCGAGGAAGATATCCAGGCTTGCGAGGAGAGGTATAACAAGAGCAAGCTGGTTCATTCGATTATGCGCCATGTTGCCGAGACAATGCAACTCGATTTAGAGGATCTGTATATCCATGTTGGTTGGCCTATGTACCGAAAATTTGGGCATGCTTTTGAGGCATTCAAGTTAATCGTCACCGATCCTGATTCTGTTTTAAATTCTCTCACTCGTGAAATTAAAGAAGTTGGTCCTGATGGGAAGGAGGTGACTAAGGTGGTACCTGCTATGTCAGAGGAGGTCAAAGAAGCTTTGATAAAAAATATTAGGAGGAGAATGACTCCACAGGCATTGAAAATCCGTGCAGACATTGAGATGAAATGTTTTCAGTTTGATGGGGTTCTTCACATCAAGGAAGCCATGCGGAAAGCTGAAGCCACTGGTAATAATGATTGTCCAGTGAAAATTAAACTGGTTGCTCCTCCGCTATATGTTCTTACCACCCAAACTCTTGACAAGGAGCAAGGGATTTCAATTCTTAACAATGCAATCAAAGCTTGCACTGAAGAAGTAGACCGCCACAAGGGGAAACTCGTTGTGAAGGAGGCACCAAGAGCTGTGAGTGAACGAGATGATAAACTAATTGCTGAGCACATCCCTGAGAATGAGGGGGTTAGTGGCGAAGAAGACAGTGAAGAAGAGGAAGATACCGGGATGGGAGAAATCGATTTGGAAAATGTGGCCACTGGAATACATGAGTGA 1023 0.4594 MATSTPNLECRMYEARYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGRQEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETMQLDLEDLYIHVGWPMYRKFGHAFEAFKLIVTDPDSVLNSLTREIKEVGPDGKEVTKVVPAMSEEVKEALIKNIRRRMTPQALKIRADIEMKCFQFDGVLHIKEAMRKAEATGNNDCPVKIKLVAPPLYVLTTQTLDKEQGISILNNAIKACTEEVDRHKGKLVVKEAPRAVSERDDKLIAEHIPENEGVSGEEDSEEEEDTGMGEIDLENVATGIHE* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02206 340 FunFam Eukaryotic translation initiation factor 2 subunit alpha 7 94 - -
Eupl05g02206 340 Pfam S1 RNA binding domain 18 92 IPR003029 GO:0003676
Eupl05g02206 340 MobiDBLite consensus disorder prediction 297 312 - -
Eupl05g02206 340 MobiDBLite consensus disorder prediction 313 328 - -
Eupl05g02206 340 Pfam Eukaryotic translation initiation factor 2 alpha subunit 130 260 IPR011488 GO:0003723|GO:0003743
Eupl05g02206 340 SUPERFAMILY eIF-2-alpha, C-terminal domain 203 317 IPR024055 -
Eupl05g02206 340 FunFam Eukaryotic translation initiation factor 2 subunit alpha 95 199 - -
Eupl05g02206 340 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 6 328 IPR011488 GO:0003723|GO:0003743
Eupl05g02206 340 ProSiteProfiles S1 domain profile. 21 92 IPR003029 GO:0003676
Eupl05g02206 340 FunFam Eukaryotic translation initiation factor 2 subunit 1 205 324 - -
Eupl05g02206 340 Gene3D - 6 94 IPR012340 -
Eupl05g02206 340 SUPERFAMILY eIF2alpha middle domain-like 94 199 IPR024054 -
Eupl05g02206 340 Gene3D EIF_2_alpha 204 325 IPR024055 -
Eupl05g02206 340 CDD S1_IF2_alpha 18 93 IPR044126 GO:0003723
Eupl05g02206 340 SUPERFAMILY Nucleic acid-binding proteins 11 92 IPR012340 -
Eupl05g02206 340 SMART S1_6 19 92 IPR022967 -
Eupl05g02206 340 MobiDBLite consensus disorder prediction 297 340 - -
Eupl05g02206 340 Gene3D Translation initiation factor 2; subunit 1; domain 2 95 199 IPR024054 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02206 Eupl-Chr5 48770191 48777300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02206 1 340 Eukaryotic Initiation Factors Gene Family AT5G05470 75.072 8.33e-179 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02206 K03237 - nnu:104597292 598.201