Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02202 ATGGCAGCAGCCCTTGAATGCTGGTCGGGTCGGGTCAGCACCGACGAAGACATGGTGGTGCAGATTTTGATGAAATCCGAGGACCAATCAGAAGGTTTCCGGGCCGGAAGTGGTAAAGAGTCGTCTCCTATGCAAAAGAGATTGCAGAAGCTCAGTCGGAATGTTGCCGGAGCTATTACAAACCTCAAGAACTCACTGAATCTCGATTCGGTTCGTGACCTTCCTACGGCTAGGATCCAGAGTTGCCGGAAGCTTGTGTGGAGTGGCGTTGTACGAAATCTCACCCAGCTCTATCCTGGTAGTCAGCTCCCTGAGAAACTCATCTCCAACATTCGTAAGCATTTCGATTCGTTACCACTCAGCTATGCCCATGCGAGTTTCGACATGGAAGATGTTTTTCTTCACATTCGACTGATCGAGCAAGCAGCGGTAGATGATCACCCTGCGGTTTTGATTCAAGAAGTCTCCGATGATGAAACCCAGGGTTCCGTTTTCAAGCTTACATTTGCTGGTAATTCCTCCATTACGTGGCCGGCGATTTCAGGGGCACTCGACAATGCGGCCATTTGTTGCAAGAAGATCCAGATCTTTGAGACAAAGTGTTCGACTCTCGGGATTGTTCTGGTTCTGGTTCAATCCGGGCAAGAGAAATCCTTCAAGAACCGGATAGAGACTGCCTTGAAATATACTCTGAAGAAGCGAAAGCCGTCAACAATGAAGCTCCCATCCGGGCTTTGTGGGTGCGAGGAGAACGTTTGGGGCCCAGGAACAGGAGAAATCAAAGACGACAATGATGAACAGAATTACAAAAATGGTATAGAGAACTCATCATTGGTTGTCTCTGTTGATGAATGGCAGACAATCAGATCAGGGGGAGAAGAGATTGGGAAATGGCTACTGAACTCCGATCAAATCGAGTTCACCGATCAGATTGGACCCAATTCCTTCAAGGGTGTTTACAAGGGAAAGCGAGTGGCAATCGAAAAGTTCAGAGGGTGTGAGAGGGGAAATGCTTATGAGTTTGAGCTCCGAAGAGATCTGTTGGAGCTGATGAGCTGTGGGCACAAGAACATTTTACAATTCCACGGGGTTTTCATCGAAGAGAATCACGGATTGTGCGTCGTGACGAAGTTGATGGAAGGGGGATCAGTTTGTGAGGTTATACAGAAGAGCAAGAAGCTTCAGGCTAAGGAGATAATAAGAATTGTTGCCAATATTGCAGAAGGAATGAAGTTCATGAATGATCATGGTGTCGCTTATCGAGATCTCAACACAGTCAAGATCCTGCTGGATCGGCAGGGGAATGCTTGTGTTGGGGACATGGGTATTGTCACAGTTTGCAAGAATATCGGAGAAGTAACAGAGTATGAAACGGATGGTTACCGGTGGTTAGCTCCCGAGATCATTGCAGGTGATCCAGAAAGCGTTACAGAGACATGGATGAGCAATGTGTATAGTTTCGGGATGGTGGTGTGGGAGATGGTCACAGGGGAGGCAGCATATGCTGCTTATTCTCCAGTTCAGGCAGCAGTGGGGATTGCTGCCTGTGGGTTGAGACCCGAGATCCCCAAGGATTGTCCGCAAGTCCTGCGATTGTTAATGACAAAATGCTGGAACAATTGTCCTTCAAAGCGCCCTCAGTTCTCCGAAATCCTTTCTATATTGCTACAACCCAACAACAACAATAGCAGGTGA 1695 0.4773 MAAALECWSGRVSTDEDMVVQILMKSEDQSEGFRAGSGKESSPMQKRLQKLSRNVAGAITNLKNSLNLDSVRDLPTARIQSCRKLVWSGVVRNLTQLYPGSQLPEKLISNIRKHFDSLPLSYAHASFDMEDVFLHIRLIEQAAVDDHPAVLIQEVSDDETQGSVFKLTFAGNSSITWPAISGALDNAAICCKKIQIFETKCSTLGIVLVLVQSGQEKSFKNRIETALKYTLKKRKPSTMKLPSGLCGCEENVWGPGTGEIKDDNDEQNYKNGIENSSLVVSVDEWQTIRSGGEEIGKWLLNSDQIEFTDQIGPNSFKGVYKGKRVAIEKFRGCERGNAYEFELRRDLLELMSCGHKNILQFHGVFIEENHGLCVVTKLMEGGSVCEVIQKSKKLQAKEIIRIVANIAEGMKFMNDHGVAYRDLNTVKILLDRQGNACVGDMGIVTVCKNIGEVTEYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMVVWEMVTGEAAYAAYSPVQAAVGIAACGLRPEIPKDCPQVLRLLMTKCWNNCPSKRPQFSEILSILLQPNNNNSR* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02202 564 Pfam Protein tyrosine and serine/threonine kinase 325 554 IPR001245 GO:0004672|GO:0006468
Eupl05g02202 564 PRINTS Tyrosine kinase catalytic domain signature 412 430 IPR001245 GO:0004672|GO:0006468
Eupl05g02202 564 PRINTS Tyrosine kinase catalytic domain signature 526 548 IPR001245 GO:0004672|GO:0006468
Eupl05g02202 564 PRINTS Tyrosine kinase catalytic domain signature 482 504 IPR001245 GO:0004672|GO:0006468
Eupl05g02202 564 PRINTS Tyrosine kinase catalytic domain signature 376 389 IPR001245 GO:0004672|GO:0006468
Eupl05g02202 564 SUPERFAMILY Protein kinase-like (PK-like) 292 555 IPR011009 -
Eupl05g02202 564 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 159 555 - -
Eupl05g02202 564 ProSiteProfiles Protein kinase domain profile. 305 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g02202 564 Gene3D Transferase(Phosphotransferase) domain 1 298 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02202 Eupl-Chr5 48707924 48710572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02202 297 557 MAP Kinase Kinase Kinase AT2G17700 31.579 1.62e-45 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Eupl05g02202 PK_Tyr_Ser-Thr 6.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02202 - - vri:117916813 910.598