Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02200 ATGAAAAAGAAAAAGAAGCATGAGTGTTCGATCTGTAACAAAAGGTTTTCTTCTGGTCAGGCTCTTGGAGGTCACAAGAGACGCCATTGGGACAGAAAGCCTGCTGCCGCTGCTCTTGCTGCTCCAAACAACAATAACAACCATGCTGAAACAAATAAGAAGAAGAGGAAGAAGAAGGAGAAGCTTATTAGCTCTATTTGTTTCGATCTCAATCTTCCACCACCACCACTATCATCAGATGAAGTCGAAGATGAGAACTTCTCCACCGAAGGATCATCGCCTGCATATCCATTAATGCCGTACTGTTAG 309 0.4337 MKKKKKHECSICNKRFSSGQALGGHKRRHWDRKPAAAALAAPNNNNNHAETNKKKRKKKEKLISSICFDLNLPPPPLSSDEVEDENFSTEGSSPAYPLMPYC* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02200 102 SUPERFAMILY beta-beta-alpha zinc fingers 3 35 IPR036236 -
Eupl05g02200 102 Gene3D Classic Zinc Finger 1 66 - -
Eupl05g02200 102 ProSitePatterns Zinc finger C2H2 type domain signature. 9 29 IPR013087 -
Eupl05g02200 102 MobiDBLite consensus disorder prediction 18 102 - -
Eupl05g02200 102 ProSiteProfiles Zinc finger C2H2 type domain profile. 7 34 IPR013087 -
Eupl05g02200 102 Pfam C2H2-type zinc finger 7 31 - -
Eupl05g02200 102 PANTHER OS02G0659100 PROTEIN 2 83 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02200 2 87 C2H2 Transcription Factor Family AT2G28200 38.202 7.86e-12 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Eupl05g02200 zf-C2H2_6 1.3e-13 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02200 - - nnu:104597298 104.76