Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02193 ATGGACGAGCGTTGGCGATTCAATCGGTTCACGCTGTTGCTGGTTTCGTATTTGTTGCATCAAAAGTTGGATTTTTGTTGGTCTCTCAACGATGAAGGGCTGGCACTGTTGAGATTTCGGGAGAGAGTGGTGTGGGATCCATTCGATGCTCTCTCGAATTGGAACCATACTGATGGTGAGGAGTATCCGTGTTCGTGGTACGGAGTGGAGTGCTCCGATGGAAAAGTTGTGAGTTTGGACTTGAAAGATCTTTGCCTTGGAGGAACACTAGCTTCTGAACTTGGGAACCTCATGCACATAAAGTCTATTATTTTACGCAATAACTCTTTTTCTGGAATCATCCCTAAAGAAATTGGAGAACTAAAGGAACTGGAGGTGTTGGATTTAGGATACAATAATTTCAGCAGACCACTTCCATCCAACCTTTGCAATAACCTGTCATTGGCAATCCTTCTACTCGACAACAACAGGTTCCTAGGTAGCTTATCCCCTGAACTTTGTGAACTTAATACGCTTTCTAAGCTTAAGGCTGATGAGAACCAGTTATCCAATGCTGCACTAGGAGCATCCAGCAACAGAAGATCTGTTACATGGAACATTGCCCAAGTTGGAGATGTAGTTTACCGGAGGCTGCTGAGGCTGCCGCAGGATGATAAAGCTAAAAATGGAAATAAAAAAAAGCAGCTGCCAACTCAGTCCGAAACATCACCATCACTTTCCCCAGCACCTTCATCATCACCATCACCATCGTCATCACCTTCATCATCTCCATCACCATCACCTTCATCATCTCCATCACCATCTTCATCTCCCCCAATCTTTCTGCCACCTTCACCCTCACCAGCACCAACGCCAGACCTGCCTTCCCCTGCGCCAGCAGATCCTCCCATTGTTATTGTTGCACCACCATTCTCCCGTTCTGCCCCAATACCTTCGCTCTCAGCAAGCCCCACGCAGTCAATAGGAATAAGTGCCCAATCAAAACATAGAATGCGATGGCCAATTTTGTCTGGAGTCGTAGGGGCTTCTTTTTTCCTTTTCATTTCAGTCTTCGGCTTTCTCTTCTGTCGAAGCAATAAGGTGGTCACCGTCAAACCTTGGGCCACAGGGTTAAGTGGGCAGCTGCAAAAAGCATTCGTAACAGGTGTACCAAAGCTCAAGCGAACAGAGCTTGAAACAGCTTGTGAAGATTTTAGTAATATAATTGGTTCTGCATCGGAGGGCTCAGTGTACAAAGGGACACTGTCAAGTGGAGTTGAAATAGCGGTGGCGTCTACTGCAGTGACATCTCCCAAGGATTGGTCAAAGCATTTAGAAGGGCAGTTCAGGAAGAAGATAGACACATTATCAAAAGTTAACCACAAGAATTTTGTGAACCTTCTTGGGTTTTGCGAGGAAGAGGAACCTTTCACTAGGATGATGGTTTTCGAGTATGCTCCAAATGGAACACTCTTTGAGCATCTGCACATTAAAGAAGCAGAACACTTGGACTGGGGAGTACGGTTGCGGATTGCAATGGGCATGGCGTACTGCCTTGAGCACATGCATCAACTGACCCCACCCGTAATCCTTAAAAACTTGCAAGCTACCGCTATCTATCTGACTGAAGACTATGCAGCCAAGATCTCAGATCTCAGTTGCTGGAATGAGGCAACTGCAGCCAAAATGGGATCAGCTGGCACGGAGCTCTTGGATATACCATCATCGGATCCGGAGAGCATCGTTTACAGTTTTGGGATAATATTGTTGGAGATGATAACGGGTAGGCTCCCATACTCAGTGGACAATGGCCCACTAGAGAACTGGGCATCGGACTATTTGAGGGGGGAGCTACCTGTACGAGACATGGTGGATCCAACCCTGAAATCTTTCCAAGAGGAGGAGCTTGAGAAACTATGCGAGGTGATAAGATCCTGCATCCATGCTGACCCAAAGCAGAGACCAACAATGAGAGAGGTTACAGCTCGATTGAGAGAGATTACGGCGATGGCACCAGATGGAGCAACACCAAAACTCTCTCCTCTTTGGTGGGCAGAGCTGGAGATTCTTTCTACTGAGGCAACCTAA 2067 0.4673 MDERWRFNRFTLLLVSYLLHQKLDFCWSLNDEGLALLRFRERVVWDPFDALSNWNHTDGEEYPCSWYGVECSDGKVVSLDLKDLCLGGTLASELGNLMHIKSIILRNNSFSGIIPKEIGELKELEVLDLGYNNFSRPLPSNLCNNLSLAILLLDNNRFLGSLSPELCELNTLSKLKADENQLSNAALGASSNRRSVTWNIAQVGDVVYRRLLRLPQDDKAKNGNKKKQLPTQSETSPSLSPAPSSSPSPSSSPSSSPSPSPSSSPSPSSSPPIFLPPSPSPAPTPDLPSPAPADPPIVIVAPPFSRSAPIPSLSASPTQSIGISAQSKHRMRWPILSGVVGASFFLFISVFGFLFCRSNKVVTVKPWATGLSGQLQKAFVTGVPKLKRTELETACEDFSNIIGSASEGSVYKGTLSSGVEIAVASTAVTSPKDWSKHLEGQFRKKIDTLSKVNHKNFVNLLGFCEEEEPFTRMMVFEYAPNGTLFEHLHIKEAEHLDWGVRLRIAMGMAYCLEHMHQLTPPVILKNLQATAIYLTEDYAAKISDLSCWNEATAAKMGSAGTELLDIPSSDPESIVYSFGIILLEMITGRLPYSVDNGPLENWASDYLRGELPVRDMVDPTLKSFQEEELEKLCEVIRSCIHADPKQRPTMREVTARLREITAMAPDGATPKLSPLWWAELEILSTEAT* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02193 688 Pfam Leucine rich repeat N-terminal domain 30 72 IPR013210 -
Eupl05g02193 688 Pfam Protein tyrosine and serine/threonine kinase 399 657 IPR001245 GO:0004672|GO:0006468
Eupl05g02193 688 Gene3D Phosphorylase Kinase; domain 1 368 478 - -
Eupl05g02193 688 MobiDBLite consensus disorder prediction 217 300 - -
Eupl05g02193 688 FunFam Nuclear pore complex protein NUP107 29 186 - -
Eupl05g02193 688 ProSiteProfiles Protein kinase domain profile. 396 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g02193 688 MobiDBLite consensus disorder prediction 226 241 - -
Eupl05g02193 688 Gene3D Ribonuclease Inhibitor 28 207 IPR032675 -
Eupl05g02193 688 MobiDBLite consensus disorder prediction 242 299 - -
Eupl05g02193 688 PANTHER PROTEIN MALE DISCOVERER 2 11 686 - -
Eupl05g02193 688 FunFam Inactive receptor-like serine/threonine-protein kinase 370 478 - -
Eupl05g02193 688 Gene3D Transferase(Phosphotransferase) domain 1 479 668 - -
Eupl05g02193 688 SUPERFAMILY Protein kinase-like (PK-like) 379 657 IPR011009 -
Eupl05g02193 688 SUPERFAMILY L domain-like 28 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02193 Eupl-Chr5 48579543 48590129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02193 28 660 Receptor kinase-like Gene Family AT1G25320 26.136 7.04e-45 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Eupl05g02193 PK_Tyr_Ser-Thr 2.4e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02193 - - csin:114320636 816.224