Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02185 ATGAAGGAAAGTGCTAGCACCGACGGGTCGAAGACTTACCATTCGAATAAGAACGAGGGTGATCAGGACGATGGTGAGGAGGTAGACGATGATGATGATGACGACGATGCAAAGCCTAGAAACGGTGGGAGCTCGAGCAACAGCACAGTTGAGGAGAATGAGAGGAAGGCAAGCTCATCTAGTGGTGTACGACAGTATGTCCGCTCCAAGATGGCAAGGCTTCGTTGGACGCCTGATCTGCACCTTTGTTTCGTTCACGCTGTGGAAAGACTGGGTGGACAAGATAGAGCAACACCTAAGCTGGTTCTTCAACTGATGAACATCAAAGGCCTCAGCATCGCTCATGTCAAGAGCCATCTACAAATGTATAGGAGCAAGAAGAACGACGACCCTGGTCAAGTCATTACCGAGCAAGGGCATCTATTGGAAGGTGCAGATCGCCATATTTACAACCTTAGCCAACTCCCCATGCTACAAGGTTTCCATCAAAGGCCTAGTTCCAGTTTCAGATATGATGATCATGCTTCTTGGAGTGGTCATGGGAGCTGGATCACTACTAGTCCTTATATGAGTAAGAACGCAAACGATAGGGCAAGGCCTGGATTTTATGGTTCTGTAGCGGAGCGGATCTTCTGTGGCAACACGACTAATCGAAATTTCCACATGGGTCATAATAACCCCAATGAACAAATTAGAAAGAGAACCCATGAACCCCAGGATGAATTTCGATTCTTATACGATCGCGAAGCCTGGCAAACCCAAATCAGACCAAGCCCAATGGAACCTAACTTCATAACCCAATTCCAACCAAGGCGAAGAGAGCAAGAGAATTGCTTGAACAACACAGACTGGAGTATAAGTACTCGAGAAGAGGGGAAGAAGGTCATCAAAAGGAAGGCTTCCGACTGTGATCTCGATTTGAATCTGTCTCTGAAATTAGCTTCATCAAGACATGAAGAGTGCCAGCAGAGAGGTTTGGAGGATGATGAAGTTGATAGTAATTTATCTCTTTCCTTGTTTTCACCTTCATCTTCAAAGCTTAGCAGGTTGAAGGAAGGAGATGATAGTAGGGATGAACATGCAAGAATGGCAAGTACTCTAGATCTGACTATATGA 1116 0.4579 MKESASTDGSKTYHSNKNEGDQDDGEEVDDDDDDDDAKPRNGGSSSNSTVEENERKASSSSGVRQYVRSKMARLRWTPDLHLCFVHAVERLGGQDRATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKNDDPGQVITEQGHLLEGADRHIYNLSQLPMLQGFHQRPSSSFRYDDHASWSGHGSWITTSPYMSKNANDRARPGFYGSVAERIFCGNTTNRNFHMGHNNPNEQIRKRTHEPQDEFRFLYDREAWQTQIRPSPMEPNFITQFQPRRREQENCLNNTDWSISTREEGKKVIKRKASDCDLDLNLSLKLASSRHEECQQRGLEDDEVDSNLSLSLFSPSSSKLSRLKEGDDSRDEHARMASTLDLTI* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02185 371 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 51 223 IPR046955 GO:0003700
Eupl05g02185 371 Gene3D - 71 128 - -
Eupl05g02185 371 NCBIfam myb-like DNA-binding domain, SHAQKYF class 72 127 IPR006447 GO:0003677
Eupl05g02185 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 128 IPR017930 -
Eupl05g02185 371 MobiDBLite consensus disorder prediction 345 371 - -
Eupl05g02185 371 MobiDBLite consensus disorder prediction 1 64 - -
Eupl05g02185 371 MobiDBLite consensus disorder prediction 41 64 - -
Eupl05g02185 371 FunFam Myb family transcription factor 70 128 - -
Eupl05g02185 371 MobiDBLite consensus disorder prediction 22 36 - -
Eupl05g02185 371 MobiDBLite consensus disorder prediction 348 364 - -
Eupl05g02185 371 Pfam Myb-like DNA-binding domain 74 124 IPR001005 -
Eupl05g02185 371 SUPERFAMILY Homeodomain-like 71 128 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02185 Eupl-Chr5 48508926 48510866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02185 60 169 G2-like Transcription Factor Family AT2G42660 51.095 1.58e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl05g02185 Myb_DNA-binding 4.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02185 - - nnu:104597309 382.104