Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02180 ATGAAGGACACTATGGGAGACCAGGGTGCGCAGACCACCAACCGGGCACATCACCATCACCACCTTACCTCCCACCACCCTTACAATGGTGGCGGTGGAGGCCGGGAGGACTGCTGGAGCGAAGGCGCAAGCGCAACCCTAATCGAAGCTTGGGGCGATCGTTACCTTCAGCTCGGCCGCGGCAACCTCCGTCAGAAAGACTGGAAGGAAGTTGCCGACGCCGTTAACGCCCGTCCGGACGGCGTTAAGCCCCGTAAGACCGACATCCAATGCAAGAACCGGATCGACACCCTCAAGAAGAAATACAAGCTCGAGAAATCGAAACCCGCTCCGTCAAAATGGCCGTTCTATTCCCGTCTCGATCAGCTCATCGGCACCACCACTCCAGCCGCCAATAAAAAAATCACGTCACCTCCTTCACTCCATAAGCCCCCCGCCGTTACTTTCACCGTTAAGCATTGCAAGGAGAAGCTAAACCCTAACCCCAACGCCGTCGTGTATTCCGGCGGCTCATCGTCCAAGTCTAGGTTGAACTCCACCGGATCCACCGAGAGCTCCCGTGGCGGTGGCGATGATGGCGGGGACGATGATATGGTGTTTGATGGCGTTGTGAGGAAGCACCGGACGAATCAGGATTCATCTGATGGACCGGCGTTTAGGGAGCTAGCGAGAGCGATTCTTAAGTTTGGAGAGGTCTACGAGAGAATTGAGAGTTCGAAGCAGCAGCAGATGATGGAGCTGGAGAGGCAGAGGATGGAGTTCACAAAGGATCTTGAGTTTCAGAGGATGCAGATGTTTATGGAAGCTCAGCTCGAGCTCGAAAAGATGAAGCGCCCGAAGTATGCGTCTAGCACTGGGAAGAAGTTATAG 870 0.5506 MKDTMGDQGAQTTNRAHHHHHLTSHHPYNGGGGGREDCWSEGASATLIEAWGDRYLQLGRGNLRQKDWKEVADAVNARPDGVKPRKTDIQCKNRIDTLKKKYKLEKSKPAPSKWPFYSRLDQLIGTTTPAANKKITSPPSLHKPPAVTFTVKHCKEKLNPNPNAVVYSGGSSSKSRLNSTGSTESSRGGGDDGGDDDMVFDGVVRKHRTNQDSSDGPAFRELARAILKFGEVYERIESSKQQQMMELERQRMEFTKDLEFQRMQMFMEAQLELEKMKRPKYASSTGKKL* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02180 289 Pfam Myb/SANT-like DNA-binding domain 36 123 IPR044822 -
Eupl05g02180 289 Gene3D - 39 104 - -
Eupl05g02180 289 MobiDBLite consensus disorder prediction 1 32 - -
Eupl05g02180 289 FunFam trihelix transcription factor ASIL2 39 104 - -
Eupl05g02180 289 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 23 278 IPR044823 -
Eupl05g02180 289 MobiDBLite consensus disorder prediction 160 200 - -
Eupl05g02180 289 Coils Coil 233 264 - -
Eupl05g02180 289 MobiDBLite consensus disorder prediction 164 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02180 Eupl-Chr5 48438846 48451305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02180 216 278 Trihelix Transcription Factor Family AT3G14180 52.381 3.72e-17 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl05g02180 Myb_DNA-bind_4 2e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02180 - - nnu:104597314 398.667