Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02173 ATGGAGATCCCTGTGGCGTACCAATCAAGCCTCCCCGCAGTACCAGACTGGCTAAACAAAGGTGACAACGCATGGCAGATGACCGCCTCGACGCTTGTCGGCCTTCAAAGCATGCCGGGCCTCGTTATCCTCTACGGTAGCATCGTTAAGAAGAAATGGGCCGTCAATTCGGCCTTTATGGCACTATACGCCTTCGCCGCCGTCCTCATTTGCTGGGTCCTTGTGTGCTATCGCATGGCATTTGGCGACAAGCTTCTCCCTTTCTGGGGTAAGGGTGCACCTGCTCTCGGTCAAAAGTACCTCATCGGCCAAGCGGCTGTGCCGGAGAGTACGCACTATCATGCAAATGGCGTGGTAGAGACGCACATGAACAGGCCATTATATCCGATGGCCTCACTTGTGTACTTCCAGTTCACTTTCGCGGCTATCACGCTTATCCTGCTGGCTGGATCGGTTCTTGGCCGCATGAACATTAAAGCCTGGATGGCTTTTGTACCTCTCTGGCTCATCTTCTCCTACACCGTCGGTGCGTTTAGTCTCTGGGGTGGTGGATTTCTCTACCACTGGGGTGTCATCGATTATTCAGGAGGTTATGTCATCCACCTCTCTTCGGGAATTGCCGGTTTCACTGCAGCCTATTGGGTCGGACCGAGATTGAAGAGTGACAGGGAGAGATTCCCTCCGAACAACGTCTTGCTTATGCTCGCCGGTGCCGGGCTACTCTGGATGGGTTGGTCAGGTTTCAATGGTGGGGCCCCTTATTCTGCCAACATCGACTCTTCGATCGCCGTTCTCAACACCAACATCTGTGCAGCAACAAGCCTCCTCATATGGACTTCTCTTGATGTGATCTTCTTTGGGAGACCTTCGGTGATCGGAGCCGTCCAAGGGATGATGACCGGCCTTGTTTGCATTACTCCAGGAGCAGGGGTGGTGCAATCGTGGGCAGCGATAGTGATGGGTATACTTTCCGGCAGCATCCCATGGTTCACTATGATGATTCTTCACAAGAAGTCTACATTACTACAGAAGGTGGACGATACACTGGGTGTATTTCACACGCACGCAGTGGCGGGGCTGTTAGGTGGGCTCCTTACTGGGCTTCTGGCGGAGCCAGTTCTGTGTAGACTCATCTTACCGGTGACAAACTCAAGGGGTGCATTCTATGGTGGTGGCGGTGGGGTGCAGTTCTTGAAGCAATTAGTTGCAGCTCTATTCGTGATTGGTTGGAATATAGTGTCGACGACGGTTATTCTTCTCACTATAAGGTTGTTCATACCTTTAAGGATGCCGGACGAGCAGCTTGTGATAGGAGATGATGCGGTGCATGGTGAAGAAGCTTATGCTCTATGGGGCGATGGTGAGAAGTATGATGCTACTAAGCACGGTTGGCATGCATCTTCCTACAACGAAATAACACCGTCCCACCGTGTTAATGGTGCAAGCGGCGTAACCATTCAGTTGTAA 1467 0.5208 MEIPVAYQSSLPAVPDWLNKGDNAWQMTASTLVGLQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVLICWVLVCYRMAFGDKLLPFWGKGAPALGQKYLIGQAAVPESTHYHANGVVETHMNRPLYPMASLVYFQFTFAAITLILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYHWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYSANIDSSIAVLNTNICAATSLLIWTSLDVIFFGRPSVIGAVQGMMTGLVCITPGAGVVQSWAAIVMGILSGSIPWFTMMILHKKSTLLQKVDDTLGVFHTHAVAGLLGGLLTGLLAEPVLCRLILPVTNSRGAFYGGGGGVQFLKQLVAALFVIGWNIVSTTVILLTIRLFIPLRMPDEQLVIGDDAVHGEEAYALWGDGEKYDATKHGWHASSYNEITPSHRVNGASGVTIQL* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02173 488 Pfam Ammonium Transporter Family 24 448 IPR024041 GO:0008519|GO:0016020|GO:0072488
Eupl05g02173 488 SUPERFAMILY Ammonium transporter 17 430 - -
Eupl05g02173 488 PANTHER AMMONIUM TRANSPORTER MEP2 10 459 IPR001905 GO:0008519|GO:0016020|GO:0072488
Eupl05g02173 488 Gene3D Ammonium transporter AmtB like domains 4 451 IPR029020 -
Eupl05g02173 488 PRINTS Rhesus blood group protein signature 232 250 IPR002229 GO:0005886
Eupl05g02173 488 PRINTS Rhesus blood group protein signature 356 372 IPR002229 GO:0005886
Eupl05g02173 488 PRINTS Rhesus blood group protein signature 263 285 IPR002229 GO:0005886
Eupl05g02173 488 PRINTS Rhesus blood group protein signature 318 336 IPR002229 GO:0005886
Eupl05g02173 488 PRINTS Rhesus blood group protein signature 137 153 IPR002229 GO:0005886
Eupl05g02173 488 FunFam Ammonium transporter 6 451 - -
Eupl05g02173 488 ProSitePatterns Ammonium transporters signature. 193 218 IPR018047 GO:0008519|GO:0016020|GO:0072488
Eupl05g02173 488 NCBIfam ammonium transporter 22 448 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02173 Eupl-Chr5 48357885 48359866 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02173 130 488 Inorganic Solute Cotransporters AT2G38290 76.045 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02173 K03320 - mof:131167637 863.218