LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl05g02172	ATGGCAGCTCCTTCCGTTGTTCCGGTGGCATACCAGGGAAACAGCACCTCTGCTGTTGTACCCGAATGGCTAAACAAGGGTGACAACGCATGGCAGATGGTCTCAGCCACTCTGGTTGGCATGCAAGGCATGCCCGGTCTTGTAATCCTCTATGCCGGCCTCGTCAAGAAGAAATGGGCTCTCAACTCTGCCTTCATGGCCCTCTATGCCTTTGCTGCCGTCATGCCGTGTTGGGTCCTCTGGGCCTACAAGATGTCCTTCGGCCGCCGGCTCCTTCCCTTCTGGGGGAAAGCTGGCCTTGCCGTCTCTCAGGACTTTTTGATCCCACAAGCCTTACTGCCCTCAACTAACCACTATAAACAGAATGGTGCACTCGAGACGGCCGCTATTCAACCTTGGTACCCGATGGCCTCTATGGTCTTCTTCCAATACGCCTTTGCCGCGGTCACTGTGATGCTCCTTGCAGGGGCCCTCCTGGGTCGGATGAACATCAAGGCTTGGATGGCTTTTGTTCCGTTGTGGCTTACTTTTTCTTATAGTGTAGGAGCTTTCAGTGTATGGGGTGGTGGGTTCCTCTTCCACTGGGGAATCATGGATTATTCTGGTGGTTATGTCGTCCATTTAGCCTCCGGTGCCGCAGGATTCACCGCAGCTTATTGGGTGGGACCAAGACTGAAGAATGACCGGGATGAATTCCCCCCAAACAACCTATTGCTTGCACTCGTTGGTGCTGGTATCTTGTGGATGGGATGGTCTGGTTTCAACGGAGGTGATCCTTTTGCTGCGAATGTTGATTCCTCCCTTGCAGTTCTTAACACCCACATCTGTGCAGCTACCAGTCTTCTAGTGTGGACTTGCTGGGATGTGATCTTCTTCGGCAAGCCCTCAGTGATTGGAGCTATCCAAGGAATGATAACTGGATTGGTCTGTATCACTCCTGGTGCAGGTCTGGTTCAGGGATGGGCTGCACTGGTAATGGGTATTGTTTCCGGAAGTATTCCCTGGTACACGATGATGTGTCTGACCAAGAAGTTCCCGTTGCTGCTGAAAGTCGATGATACTCTCGGTGTCTTGCACACCCATGCAGTCGCCGGTACCTTGGGTGGGGCCCTTACAGGACTTTTCGCGCACCCGACGCTCTGTAGCATGTTCCTCCCAGTTACCAACTCTAAAGGGGCGTTTTATGGGAGTCCAGGTGGGGTCCAGTTCTTGAAACAGTTGGTAGGGGCAAGTTTTATTATAGGTTGGAACGTCTTGGTGACGTCCATCATTCTCTTGGTCATTCGAGTGTTAATACCCCTAAGGATGTCTGAGGAAGAACTTGTGATCGGTGATGATGCAGCTCATGGTGAAGAGGCCTATGCTCTGGCCGGACAAGGACAGAGGGACATCACCACACACAACGGTACAACCCCATATGATGTCTAG	1428	0.5231	MAAPSVVPVAYQGNSTSAVVPEWLNKGDNAWQMVSATLVGMQGMPGLVILYAGLVKKKWALNSAFMALYAFAAVMPCWVLWAYKMSFGRRLLPFWGKAGLAVSQDFLIPQALLPSTNHYKQNGALETAAIQPWYPMASMVFFQYAFAAVTVMLLAGALLGRMNIKAWMAFVPLWLTFSYSVGAFSVWGGGFLFHWGIMDYSGGYVVHLASGAAGFTAAYWVGPRLKNDRDEFPPNNLLLALVGAGILWMGWSGFNGGDPFAANVDSSLAVLNTHICAATSLLVWTCWDVIFFGKPSVIGAIQGMITGLVCITPGAGLVQGWAALVMGIVSGSIPWYTMMCLTKKFPLLLKVDDTLGVLHTHAVAGTLGGALTGLFAHPTLCSMFLPVTNSKGAFYGSPGGVQFLKQLVGASFIIGWNVLVTSIILLVIRVLIPLRMSEEELVIGDDAAHGEEAYALAGQGQRDITTHNGTTPYDV*	476

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl05g02172	475	FunFam	Ammonium transporter	10	457	-	-
	Eupl05g02172	475	PANTHER	AMMONIUM TRANSPORTER MEP2	14	463	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Eupl05g02172	475	NCBIfam	ammonium transporter	28	454	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Eupl05g02172	475	ProSitePatterns	Ammonium transporters signature.	199	224	IPR018047	GO:0008519\|GO:0016020\|GO:0072488
	Eupl05g02172	475	Pfam	Ammonium Transporter Family	30	454	IPR024041	GO:0008519\|GO:0016020\|GO:0072488
	Eupl05g02172	475	SUPERFAMILY	Ammonium transporter	23	436	-	-
	Eupl05g02172	475	Gene3D	Ammonium transporter AmtB like domains	4	459	IPR029020	-
	Eupl05g02172	475	PRINTS	Rhesus blood group protein signature	143	159	IPR002229	GO:0005886
	Eupl05g02172	475	PRINTS	Rhesus blood group protein signature	238	256	IPR002229	GO:0005886
	Eupl05g02172	475	PRINTS	Rhesus blood group protein signature	269	291	IPR002229	GO:0005886
	Eupl05g02172	475	PRINTS	Rhesus blood group protein signature	324	342	IPR002229	GO:0005886

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl05g02172	Eupl-Chr5	48343715	48347910	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl05g02172	136	467	Inorganic Solute Cotransporters	AT2G38290	70.571	6.39e-167	473

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl05g02172	K03320		-	csin:114294953	795.808