Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02157 ATGACTCTCCGGTTTCCATTACTGATACTTCTATCCGCTTCTTTCTTCTCTCTCGTTTTTGGAGCAAAAACCGTCGATCCGTACAAGGTTCTCGGGGTTGAGCGAAATGCGAGTCAACGTGAAATTCAAAAAGCTTTCCATAGACTTTCTCTCCAATATCACCCTGATAAGAATAAAAACAAGGGTGCACAAGAGAAGTTTGCTGAAATTAATAACGCATATGAAATTCTATCTGATGAAGAGAAAAGGAAGAATTATGATCTATATGGGGATGAAAAGGGCAGTCCTAGGTTTGATGCCGGCACTCCTGGGGATGACGGGGGATATACTTATTTCACCAGCGGTGGCCAGGGAAACAGTCGCTTTACCTTTAGACCGAATGAGTGGCAAAGGATGGGTGGCCAGGGAAATTCTGACTCATTCTCATTTTCCTTTGGCAATCCCAGTAGTGGGAGTTCATTCAGTTCTGGCTTCAATGAGCTTTTCTCCAATTTTTTTGGTGGTGATACGAAAGGCGGGAGCCAGTTTGGTGGTTTTGGTAGGTCGACTGGATCTCAGGCTGGGTCTAGAACTTCCCCTAATAGCATCCAGGTTGTTACTTCTCTGGTGTTCAAGAAAGACATAGCTGATCAAGGGATCACCTGGATTTTGTTATCTTACATGCCCACATCAAAGGGATATCATGTCTTAGAGTCTATAATTGAGGAGATTACCCACTCATTCCAAGGAGCCATGAAGGCTGGCAGCATAAATTGCCAAAAAGAACAGTCTCTGTGTAAGGAACTTGGTTTAAAGCCCTTCAAATCAGCCCGGGTATTTGCTTATTCATATAAAGCAAGTGAGAAAGGTTCACTGGTAGAGTACAATGGTGATTGGGAAGCAAAATCTTTGAAGACTTTCTGCCAAGATCAGTTGCCAAGATTTTCAAGACGGGTAGACTTTGGTCTTTTTGATCTTTCCTCAAGCACTGTTGAAAACCTACCTCGGGTGCTGCTACTCTCTACAAAAAAAGATACACCTGTGATCTGGCGTGCTCTCAGTGGCTTGTATCGCAAGCGCATCATCTTTTATGATGCAGAGGTCCACGATGTTTCAAATCCAATGGTGAAGAAGTTAGGAGTTGATGCACTTCCAGCTGTTGTTGGTTGGCTGTCAAATGGGGAGAAGCATGTCATCAAAACTGGAATTACTGTAAAAGATTTGAAATCAGCAATTGGTGAGCTGAGCATCTTACTTGATGGTTTTGAGAAAATGAATAAGAAGGCAGCTTCAAGTCAGTCTAAAAGGCCCAAACAGACTGAATCACAAGAGACACAAGTGCCTTTGCTTACGGCTTCAAATTTGGATACTCTGTGTGGAGAGAGGACTCCAGTATGCATTATTGGTGCTTTCAGATCTTCAAAAGCAAAGGAGAAGCTAGAATTCATTCTGTCCACCGTCTCTCAGAAGTCACTAACGAGGCGACAAAATCCAGTTTCCAGTTCTGGGAGTTCTGTTTCCTACATCCTGTTGGATGCTAACAAGCAGCCAGAATTCCTCGAGTCCTTTGACAAGTCTGGTTTCAAGTCCTTGGATAGGCTTCTAGTAGCTTACAAGCCCCGGAAAGGGAAATTTGCAGCATTCACAAATGAAATGACTATGGAGGAGGTGGAGAGGTTCATCAGTTCAGTTATGAATGGGGACAAACAGTTCAACAAGATACAGCAGAAGCCTGTGCTCAAGTGA 1725 0.4342 MTLRFPLLILLSASFFSLVFGAKTVDPYKVLGVERNASQREIQKAFHRLSLQYHPDKNKNKGAQEKFAEINNAYEILSDEEKRKNYDLYGDEKGSPRFDAGTPGDDGGYTYFTSGGQGNSRFTFRPNEWQRMGGQGNSDSFSFSFGNPSSGSSFSSGFNELFSNFFGGDTKGGSQFGGFGRSTGSQAGSRTSPNSIQVVTSLVFKKDIADQGITWILLSYMPTSKGYHVLESIIEEITHSFQGAMKAGSINCQKEQSLCKELGLKPFKSARVFAYSYKASEKGSLVEYNGDWEAKSLKTFCQDQLPRFSRRVDFGLFDLSSSTVENLPRVLLLSTKKDTPVIWRALSGLYRKRIIFYDAEVHDVSNPMVKKLGVDALPAVVGWLSNGEKHVIKTGITVKDLKSAIGELSILLDGFEKMNKKAASSQSKRPKQTESQETQVPLLTASNLDTLCGERTPVCIIGAFRSSKAKEKLEFILSTVSQKSLTRRQNPVSSSGSSVSYILLDANKQPEFLESFDKSGFKSLDRLLVAYKPRKGKFAAFTNEMTMEEVERFISSVMNGDKQFNKIQQKPVLK* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02157 574 Gene3D Glutaredoxin 183 304 - -
Eupl05g02157 574 ProSitePatterns Nt-dnaJ domain signature. 67 86 IPR018253 -
Eupl05g02157 574 PRINTS DnaJ domain signature 62 82 IPR001623 -
Eupl05g02157 574 PRINTS DnaJ domain signature 82 101 IPR001623 -
Eupl05g02157 574 PRINTS DnaJ domain signature 28 46 IPR001623 -
Eupl05g02157 574 PRINTS DnaJ domain signature 46 61 IPR001623 -
Eupl05g02157 574 Pfam DnaJ domain 26 87 IPR001623 -
Eupl05g02157 574 SMART dnaj_3 25 82 IPR001623 -
Eupl05g02157 574 SUPERFAMILY Thioredoxin-like 193 306 IPR036249 -
Eupl05g02157 574 Gene3D DnaJ domain 20 100 IPR036869 -
Eupl05g02157 574 ProSiteProfiles dnaJ domain profile. 26 90 IPR001623 -
Eupl05g02157 574 PANTHER DNAJ PROTEIN ERDJ3A 7 574 - -
Eupl05g02157 574 CDD DnaJ 26 79 IPR001623 -
Eupl05g02157 574 SUPERFAMILY Chaperone J-domain 22 109 IPR036869 -
Eupl05g02157 574 Coils Coil 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02157 Eupl-Chr5 48163081 48167677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02157 28 89 C2H2 Transcription Factor Family AT1G74250 42.647 7.70e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02157 - - nnu:104594942 788.489