Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02152 ATGGAAAGAAAGAACGTTTCCTCTCGTTCTCTTCAATGGGTTCGAGGGAAGTGTATAGGGAAAGGCTCGTTTGGCACTGTTAGCCTTGCCGTGAACAAATCGAACGGTCGAATTTTCGCGGTGAAGTCCGTTGATTCAAAGACGGCGATCCCTTCTCAACTTGAATCTCTAGAGAACGAAATCAGAATTCTCCAATCTCTTTCATCGCCTCACGTGATTGAGTACTTAAACGACGACCTAACACACGAATCTACGAGCGCGGTGTACCGGAATTTACACATGGAATACATGCCCGGCGGAACGGTTGCTGATGTGGCAGGGCAATTTGGTGGGAAAGGCGCCCATGTGGATGAGCACATTTTACGGTCATACACTTGGTGCATCCTCTCCGCGTTGCGTTACTTGCACTCCAAGGGTATCGCCCATTGCGATGTGAAGGGGAAGAACGTCCTAGTGGGCTCCACTCCTGGTGTCGCGAAGCTCGCTGATTTTGGGTCTGCGAAGAGAATCTCCGATCACTCAAATCTCGAGGAGGAAAAGGTGATGATCTTGCCACGCGGGACCCCACTTTGGATGGCGCCGGAAGTAATTCGACAGGAGCGGCAGGGACCGGAGTCTGATGTTTGGTCATTGGGTTGCACAATTATTGAGATGATCACTGGAAAACCAGCATGGCAAGATTGCGGTGCTACAACGGTGTACCAAATCGGTTTCTCAAATGAATTGCCAGAATTCCCGGCTCAATTGTCGGAATTGGGTCACGATTTTCTTGACAAGTGCCTGAGGAGGGAACCCAGTGAACGATGGACGTGTGAGCAATTGTTACGACACCCATTCGTGTCGGCCGATATCGTTACCAAATCATCTCCTCGAAGCATATTTGATTGGCCTAATTTAGAATTTCTCGACATCGACGACGACGAAGAAGAAGAAGAAATTCGGCTTATTTTTAATTATGATTCTCATAATTCAAATTCCAATTTTTTAATTTCAGCCAAGGAGAGGATTGGGGAATTAGCTTCCAGTAGAGGGGTAGTTTGGGAATCAGATGGTTGGGAAGTGGTGAGGAGGTCGGGTTTATTTTGTGACAGAGGAGAAGCTGGTCTGGTTAGAACCAGAGAGGAGAGGATAGAGACAAGTTCGAGGGATTCGAATATTACGAGGGCTGGTGAGGAAAGTGAGGGGATAAGCTTGGAATATTTAAATTCTTTTAGTTGTGACAACTTCCCTAGTTGTAGTTGTTGCAGAGCTGGTTTGGGCTGTCAGCAAGGGTTGGAAAAGAGGGATTTGGTGGTGGTGGTGGAGAGAGAGAACGTCTGTTACAATCCGTGCATCTCTCTCTCCGACTTGGAGAGTTTGAAGGTATTTTTCGCTGCATCAGATCTCGCAGCGATCAAAACTACTAGCGGTTTTGTAGTTCTTTCTGTCGGTGCTGAAACCCTGGTTTTGAACCCTCGATAG 1461 0.475 MERKNVSSRSLQWVRGKCIGKGSFGTVSLAVNKSNGRIFAVKSVDSKTAIPSQLESLENEIRILQSLSSPHVIEYLNDDLTHESTSAVYRNLHMEYMPGGTVADVAGQFGGKGAHVDEHILRSYTWCILSALRYLHSKGIAHCDVKGKNVLVGSTPGVAKLADFGSAKRISDHSNLEEEKVMILPRGTPLWMAPEVIRQERQGPESDVWSLGCTIIEMITGKPAWQDCGATTVYQIGFSNELPEFPAQLSELGHDFLDKCLRREPSERWTCEQLLRHPFVSADIVTKSSPRSIFDWPNLEFLDIDDDEEEEEIRLIFNYDSHNSNSNFLISAKERIGELASSRGVVWESDGWEVVRRSGLFCDRGEAGLVRTREERIETSSRDSNITRAGEESEGISLEYLNSFSCDNFPSCSCCRAGLGCQQGLEKRDLVVVVERENVCYNPCISLSDLESLKVFFAASDLAAIKTTSGFVVLSVGAETLVLNPR* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02152 486 FunFam Serine threonine protein kinase putative 11 336 - -
Eupl05g02152 486 Pfam Protein kinase domain 15 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g02152 486 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Eupl05g02152 486 SMART serkin_6 13 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g02152 486 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 8 344 - -
Eupl05g02152 486 Gene3D Transferase(Phosphotransferase) domain 1 6 342 - -
Eupl05g02152 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Eupl05g02152 486 ProSiteProfiles Protein kinase domain profile. 13 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g02152 486 SUPERFAMILY Protein kinase-like (PK-like) 13 305 IPR011009 -
Eupl05g02152 486 CDD STKc_MAPKKK 12 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02152 Eupl-Chr5 48080555 48091577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02152 6 356 MAP Kinase Kinase Kinase AT1G07150 53.239 2.68e-117 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Eupl05g02152 Pkinase 6.2e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02152 - - nnu:104595008 533.102