Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02150 ATGTCCTTTGCCGTTGTTGTTAAGAGCTCTCCTGTCATGAGCTCTCCTGTCTTCTCTCCATCAAGGGTTTCCCTCTTCTGCAAAACCACAGTTTCGTCTCCTGAAGCCCTAACCCTAAATCACCATGGATCATCTTTGTCGTCTCCTTGTTCGTCTTCTGGTTCTGCACAATCTTCTCCGTTCAGGTTACGGCTTCAGAAATCACCGAGCGTGTTTCGAGTTTGTAACAAGGAAGAATTTGGTGGTGGTATGGATTCAAGTTCTTCTCCGGCTACGCTTTTGAAGAGGAAGAGACCCGCGAGGATCAATATTCCTATTGCTTCGTTGAGTTTCACGGCCGCGGTGACGCCGAAGCCGTTGGCGGCCGAGATAGAGGTGAAGATGGAGAGAGAAGGGTTCTCTGTTTATTGTAAGAGAGGGAGGAGGGAGGCAATGGAGGATCGGTATTCTGCTGTCCTCGATCTTCAAGGAGATCCTAAACAGGCTTTCTTTGGTGTTTTTGATGGGCATGGAGGTGCAAAAGCTGCGGACTTTGCCTCAGAGAACATAGATAAGAACATTATGAATGAATTGACGAGGAGAAGAGGAGAAGAAATTGTTGAGGCAGTTAAACATGGTTACCTGACCACCGACTCAGAGTTTTTGAAGGAGGATGTTCGTGGTGGCACTTGCAGTGTGACTGCATTGATCAGGAAAGGTGATCTTGTGGTCTCCAATGCTGGGGACTGCCGAGCGGTTATGAGCAGAGGAGGGATTGCGGAGGCCCTCACATCTGATCATCGACCTTCAAGAGAAGATGAAAGACACCGGATTGAGACCCAGGGTGGCTATGTGGATTTCTGCCATGGCGTGTGGAGATTACAAGGGTGTCTGGCTGTATCTAGAGGGATCGGAGATCAACACCTTAAACAATGGGTAATAGCAGAGCCCGAGACAAAAGTCCTTCGGATTAATCCAGACTGCGAGTTCTTAGTCCTGGCCTCTGACGGTCTATGGGACAAGGTTACTAATCAGGAGGCAGTCGATATTGCTCGACCATTGTGTGTAGACCCCGTTAAGCCAGCAACATTGTCTGCCTGCAAAAAGCTTGCGGAGCTGGCTGTAATGCGAGGCTCTATTGACGATATAAGTGTGATGATAATTCAATTGAGAAATTTTATTTGA 1164 0.4802 MSFAVVVKSSPVMSSPVFSPSRVSLFCKTTVSSPEALTLNHHGSSLSSPCSSSGSAQSSPFRLRLQKSPSVFRVCNKEEFGGGMDSSSSPATLLKRKRPARINIPIASLSFTAAVTPKPLAAEIEVKMEREGFSVYCKRGRREAMEDRYSAVLDLQGDPKQAFFGVFDGHGGAKAADFASENIDKNIMNELTRRRGEEIVEAVKHGYLTTDSEFLKEDVRGGTCSVTALIRKGDLVVSNAGDCRAVMSRGGIAEALTSDHRPSREDERHRIETQGGYVDFCHGVWRLQGCLAVSRGIGDQHLKQWVIAEPETKVLRINPDCEFLVLASDGLWDKVTNQEAVDIARPLCVDPVKPATLSACKKLAELAVMRGSIDDISVMIIQLRNFI* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02150 387 SMART PP2C_4 125 381 IPR001932 -
Eupl05g02150 387 Gene3D - 122 387 IPR036457 -
Eupl05g02150 387 ProSiteProfiles PPM-type phosphatase domain profile. 132 383 IPR001932 -
Eupl05g02150 387 SMART PP2C_SIG_2 143 383 IPR001932 -
Eupl05g02150 387 FunFam probable protein phosphatase 2C 25 125 386 - -
Eupl05g02150 387 ProSitePatterns PPM-type phosphatase domain signature. 163 171 IPR000222 GO:0043169
Eupl05g02150 387 CDD PP2Cc 132 383 IPR001932 -
Eupl05g02150 387 SUPERFAMILY PP2C-like 132 385 IPR036457 -
Eupl05g02150 387 Pfam Protein phosphatase 2C 133 376 IPR001932 -
Eupl05g02150 387 PANTHER PROTEIN PHOSPHATASE 2C 96 382 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02150 Eupl-Chr5 48060949 48063507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02150 12 387 PP2C-type Phosphatase Gene Family AT2G30020 62.500 9.28e-158 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02150 K17506 - nnu:104594934 509.22