Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02139 ATGGCGGCTCTGCTTGAAGAAGTTTCCGAGAAGAGGAAGAAACGCAAGAGGAAAGAAAACAAAAAGTGCAAAAGAAATCTTCTTGTTGGAGAGACGGTGGAGGTGAGGAGTATCGAGGAAGGGTTCCATGGGTCATGGCACTCTGGAACTATCATTGGCTGCGACGATTTAGTCCGTCATGTGAGGTACGCCCATCTTCTTCTCGATGATGGTTCTGTGCAACTCACCGAATCGATTTGTGTTTCTTCTATGATCGAAGGCCTCGTTCCCGACGATGGAACCCTGAAAAACTACCGTGGTTTGATAAGGCCGGTGCCTCCTTTACTGGCTGTCCAAAAATGGGGACTGCATTATGGATTTTGTGTAGATGCTCATGTAAACGATGCTTGGTGGGAAGGTGTGGTCTTCGACCACGAGGACGGTTCAGAGGAGAGGTTGATCTTTTTCCCAGATTTGGGGGATCAACAGACAGTTAGGATCGAGGACTTGCGGATCACCCGTGATTGGGACGAAGTGTCGGAGTGTTGGAAGATTCGCGGGAACTGGTTGTTTCTCGAGTTGATTGAGGAACATGAGCCGGAGTGGCCGTCGGTTGTTTCAGTTAGACAGATTTGGTATAATGTGAGGGCTAAAGAGGATTTCCAAAAAAGAATTAGTGAGTGGACTTGTAAGGTGAGATCACTGTGGGATGTTTTGGTGCTGGAGGTTATTAAGGACAACATGTATCTAACCGCAGAGCATGTTCTTAATGTTATTGACTCACATGGAGTGAATTCGGCCGAGGGACCGAGTAAAAGGAGGAATACCAGCAAGTATAAATTTTCATCTAGTGGGGCTCTTTCAAGAGGCCAGGTGGAGGAAACTCAGACTATGTGGCCTTTAGCTACACCTGATGAAAATGTTAACTCGAAACCTGAAGCAGATTTGACTAACTCGCAAAGTAAAAGAAGGAAAACCATTGCTTCAAATGAGGTTGATTCGGGAGGTCAAGTAGAGGAGTGTATTCCACGACTTATATTGCAGAATGAGGAAAGCCGACCTGTTTCATATGTACCTCCTGGGTCAGACTCTTGTCCTCTTGTACCCATTGGGAATGTTGGGTCATTGGATGATCTTCTGATGGAGGATGATGATTGCTGTGTTGGTAATCTTTTAGATCATTCTTTTGATATAAAGGATATGACTTTGGAGGATCTTGCTGGTTTTAGCTGTGAGGTTATTGATGGTAGCTTGGCATCTAAGGTGATGCCTACTGATCCAAATTCATTTGCTTGTATTGGTTTTTCCACCAATGACAAAAGGGATCATCTCACAAAAACATTAAGCAGAGACGAAGCTCGAGGAAGAAACAAACATTGGCTACCGGTGGGCCCTGACGTACTTCCAGGAGCCGAATACTGCCCTGATGCATTAGTAAATTACTTACTCGTTGCAGAAGATGCAAGGTCTCACCACAGAAGATCAAAAGATATCAATCGTTCTACTACAATATTAAAAGCTAGGATGCATATCTCACATTTGGGTTGGAAGATTGAGTTTACGAAAGATAAAACCAAAAAAGATAAATCCATGCTTAGAGTCCGTTATATTTCACCTGATGAGAAGACCATGTATTCTCTGCTTGAGGTCTGTAAGTATCTGACAAAAACTAAAAGAAAGGTTTGTACTAGGAGCTCCCAAAAGGGTTACCAAAGTAATGTAAGGCAAGTAGCTCCTGTTTCTGATGTTGCAGTCATTGAACCTGGATATTGTCCCCAAGCTGTGATAGATTGGTATGAGCTAGTTTCGGGGAGAAAGAAGCTGAAACTGGACAACCAGAGTAGAGATGTTAGGCATTTGAGTTTAAAAGCAAGGATGCACCTCGTGGCTGTTGGGTGGAGATTCTGGTACGTCGAGAAGCAAAATGAAAAGCGTGAATTACGTTATACTTCGCCGAAGGGGAGGTCTTATTATTCTCTTATAACAGCTTGCAAGTGTTGTATGGAAGAAGAAGGATTTTTTGAGAGTACGAGACCGATGGAAGGCATGATTGCTGGTGAGGAATCCAAAGGCCTATTATCTTCTGCGATAATGTGTACTGAGGTCGAGGAAAGTATCTTGCCAATAAATGGGCAGTCTGAAAATGGTTATATGGAGTCATCCGATTTGTTACAGTCAAGAGAATTTCTTGAATTTGCTAATGTACAGGTCAAAGGACTTAGAAGCCACAGGAAGAGGCGAAAGAACTGTTCTTTTCCTTTTGTATCTAGATTACTTCAAAGTCAGACAAGTTCCCATTTGCAGACTAGCCAAGATGGAATGGCTGTAGCTGTTTCACATGAAAGGAAGTTGAGAGACCCACTGGATCACAATGCTGGAACTCGAGAACAGAAGAAACGAAAGGCATCTAGAGCTCTAATCAAACAAGATAAATTGGGTGGTAGCTACCGAACCCGTGTATTGCGATCGAGCAAAAGAGCTCGGCAAGTCGTGGTACCAAGTCCTGTGCATCGCACCCCTAGAACCGTTCTGTCTTGGTTGATAGACAACAATGTGGTCTTGCCAAGGGCAAAAGTACATTACGTGGGTAGAAAGGACCACCGTCGGATGGCCGAAGGGCGGATAACTCGTGAAGGAATCAGGTGCAACTGCTGCCGAAAGGTTTTTGGTCTCACAAGCTTCGAAGCTCATGCTGGTAGCACTCATCACCGACCATCTGCCAACATTTTTTTGGAAGATGGCAGGTCTCTGTTGCAGTGCCAGAAGCAAATAGTACAGGATAATAAGCTGAAAAGCTTCAGATCAGAACCACACGAGAGAATCAAGAGAAATCAGCCTCTCAACAAGAATGACTACATATGCTCTGTCTGTCACTATGGGGGTACATTATTACTGTGTGATCAATGTCCATCCTCATTTCATTTAAGCTGCCTTGGTTTAAAGGATTTGCCAGAAGGAAAGTGGTTCTGCCCATCTTGTCGATGTGGTATATGTGGCCAGAAAGAGTTTAATGGAAACACTGAACAATTCACAGAGAAGACAGTTCTATATTGCGATCAATGCGAGCGTGAATATCACGTGGGGTGCATAAGGCAAAGAGGACTGGTGAGGCTGAAAAGCTGTCCAAAAGGAAATTGGTTTTGCAGTAAAAAATGTGAAAAGGTTTTTGTGGGTCTCCATAAACTTTTGGGAAAATCGATTTCAGTTGGTGTGGACAAATTATCATGGACCATTTTGAAATCCTCGAAAGACGAATATCACTATTTTGATGCATCTGATATTGAGACTATGACAGAGCATCACAGCAAGCTCAATGTAGCACTTGGTGTGATGCACGAGTGCTTTGAACCTATTAAAGAACCACACACCAATAGAGATCTCATTGAAGATGTTCTTTTCAATAAATGGTCAGAGTTGAGTCGGCTGAACTTTCGAGGATTCTACACCGTGCTTTTGGAAAGGGAGGATGAACTGATCTCTGTGGCTACAGTTAGGGTATATGGTGAAAAGGTGGCAGAAGTACCCCTTGTTGGTACCCGTGTCCAATATCGTCGTCGGGGGATGTGCCGCATTCTAATGGATGTGCTCGAAAAGAAGCTCACAGAATTAGGAGTGGAGAGGCTGCTTTTGCCTGCTGTTCCGCAATTGCTACATGCATGGACCACATCGTTTGGATTCTCCAAGATGACAAACGCAGAGAGATTGAAGTATTTAGAGTACACATTCTTGGGTTTCCAGGACACTACCATGTGCCAAAAAATCTTGAGGACCACAACTACAGTAAAATTAATGGAATCAAGAAGAAATGGACATAAAATTGGAGATGAACTCGATCGAAATGATGAGAATATTGATCCGGACTGGTACAATGTGGTTAATGAAGTAGTTCAAGCAGAACAAATCGAGCAAAGTGAAATTGTGGAGCAAATACTAGTGGAAATACCGGTGGATGTTGCTGCCGTCAATGGTTTGTCAGTTGAGACGGGTTCTCCGATAGCTGTGGACACACAAGTGACTGATCCCGAACGGAACCCGCAAAACAGTGAAATGGATATAGGTGGAGAGTGCTCAAATAAAAGTTCTAATGAAAGGAAGGAATACGGGAGCCTTGGTAATTATTGTATGAAGTACTATCGGCGAAGGAAAATTGGTATTGGTGGACAGTGCTTGCGTAAGAGTTCAGGTGTGAAGAAGGAAAATGATGGGTTCAGCAAGGACTCTTACAAATGCTACGAGCGACGGAGATATCGGGCAACTAGAACTCGTCAAGCCAGTTATCAAGATCAAGGCGGCCTTTGTTGTAACCTTATTTTTGTTCAGTGA 4302 0.4358 MAALLEEVSEKRKKRKRKENKKCKRNLLVGETVEVRSIEEGFHGSWHSGTIIGCDDLVRHVRYAHLLLDDGSVQLTESICVSSMIEGLVPDDGTLKNYRGLIRPVPPLLAVQKWGLHYGFCVDAHVNDAWWEGVVFDHEDGSEERLIFFPDLGDQQTVRIEDLRITRDWDEVSECWKIRGNWLFLELIEEHEPEWPSVVSVRQIWYNVRAKEDFQKRISEWTCKVRSLWDVLVLEVIKDNMYLTAEHVLNVIDSHGVNSAEGPSKRRNTSKYKFSSSGALSRGQVEETQTMWPLATPDENVNSKPEADLTNSQSKRRKTIASNEVDSGGQVEECIPRLILQNEESRPVSYVPPGSDSCPLVPIGNVGSLDDLLMEDDDCCVGNLLDHSFDIKDMTLEDLAGFSCEVIDGSLASKVMPTDPNSFACIGFSTNDKRDHLTKTLSRDEARGRNKHWLPVGPDVLPGAEYCPDALVNYLLVAEDARSHHRRSKDINRSTTILKARMHISHLGWKIEFTKDKTKKDKSMLRVRYISPDEKTMYSLLEVCKYLTKTKRKVCTRSSQKGYQSNVRQVAPVSDVAVIEPGYCPQAVIDWYELVSGRKKLKLDNQSRDVRHLSLKARMHLVAVGWRFWYVEKQNEKRELRYTSPKGRSYYSLITACKCCMEEEGFFESTRPMEGMIAGEESKGLLSSAIMCTEVEESILPINGQSENGYMESSDLLQSREFLEFANVQVKGLRSHRKRRKNCSFPFVSRLLQSQTSSHLQTSQDGMAVAVSHERKLRDPLDHNAGTREQKKRKASRALIKQDKLGGSYRTRVLRSSKRARQVVVPSPVHRTPRTVLSWLIDNNVVLPRAKVHYVGRKDHRRMAEGRITREGIRCNCCRKVFGLTSFEAHAGSTHHRPSANIFLEDGRSLLQCQKQIVQDNKLKSFRSEPHERIKRNQPLNKNDYICSVCHYGGTLLLCDQCPSSFHLSCLGLKDLPEGKWFCPSCRCGICGQKEFNGNTEQFTEKTVLYCDQCEREYHVGCIRQRGLVRLKSCPKGNWFCSKKCEKVFVGLHKLLGKSISVGVDKLSWTILKSSKDEYHYFDASDIETMTEHHSKLNVALGVMHECFEPIKEPHTNRDLIEDVLFNKWSELSRLNFRGFYTVLLEREDELISVATVRVYGEKVAEVPLVGTRVQYRRRGMCRILMDVLEKKLTELGVERLLLPAVPQLLHAWTTSFGFSKMTNAERLKYLEYTFLGFQDTTMCQKILRTTTTVKLMESRRNGHKIGDELDRNDENIDPDWYNVVNEVVQAEQIEQSEIVEQILVEIPVDVAAVNGLSVETGSPIAVDTQVTDPERNPQNSEMDIGGECSNKSSNERKEYGSLGNYCMKYYRRRKIGIGGQCLRKSSGVKKENDGFSKDSYKCYERRRYRATRTRQASYQDQGGLCCNLIFVQ* 1434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02139 1433 MobiDBLite consensus disorder prediction 256 325 - -
Eupl05g02139 1433 Pfam Tify domain binding domain 866 916 IPR032308 -
Eupl05g02139 1433 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1085 1262 IPR000182 GO:0016747
Eupl05g02139 1433 PANTHER PHD FINGER PROTEIN 12 578 1351 IPR042163 GO:0003714|GO:0045892
Eupl05g02139 1433 SUPERFAMILY FYVE/PHD zinc finger 934 987 IPR011011 -
Eupl05g02139 1433 Coils Coil 1 21 - -
Eupl05g02139 1433 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 938 987 IPR013083 -
Eupl05g02139 1433 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 988 1048 IPR013083 -
Eupl05g02139 1433 SMART agenet_At_2 25 92 IPR014002 -
Eupl05g02139 1433 SMART agenet_At_2 114 171 IPR014002 -
Eupl05g02139 1433 Pfam Agenet domain 30 107 IPR008395 -
Eupl05g02139 1433 SUPERFAMILY FYVE/PHD zinc finger 988 1044 IPR011011 -
Eupl05g02139 1433 Gene3D - 481 569 - -
Eupl05g02139 1433 ProSiteProfiles Zinc finger PHD-type profile. 944 989 IPR019787 -
Eupl05g02139 1433 MobiDBLite consensus disorder prediction 1329 1354 - -
Eupl05g02139 1433 Gene3D - 1112 1248 - -
Eupl05g02139 1433 SMART PHD_3 946 987 IPR001965 -
Eupl05g02139 1433 SMART PHD_3 988 1045 IPR001965 -
Eupl05g02139 1433 MobiDBLite consensus disorder prediction 261 325 - -
Eupl05g02139 1433 Pfam PHD-finger 946 988 IPR019787 -
Eupl05g02139 1433 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1104 1224 IPR016181 -
Eupl05g02139 1433 CDD NAT_SF 1143 1203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02139 Eupl-Chr5 47852652 47870524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02139 26 254 PHD Transcription Factor Family AT5G58610 47.391 2.74e-59 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Eupl05g02139 Agenet 7.4e-12 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02139 - - tss:122657751 1142.1