Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02127 ATGGATGGGCATCATCATCATCTTGGTGTTAACATAGAAACAGGAGATCGATTTCCTCAATGGAGTCTTCAAGAAACAAAAGAATTCCTAAACATCCGAGCCGAACTCGATCGAACCTTCATGGAAACCAAACGCAACAAGCTTTTATGGGAAGTTGTTTCTACAAAAATGAAGGAGAAGGGTTACAATCGTAGCACCGATCAGTGCAAGTGCAAGTGGAAAAATCTTGTTACACGCTATAAGGGATGTGAAACTATGGAGCCTGAAGCCATGAGACAACAATTCCCTTTCTATAACGAGCTTCAGGCGATCTTTACGGCTAGGATGCAGAGGATGTTATGGCTTGAAGCTGAAGGTGGAGGAAGTAGTAGTTTGAAAAAGAAAGGGGTTCGATTATCATCGGACGATGAAGAGGATAACGAAGAAAGCGATGAGGAGAAGGGTAGTAGTAAGAAGAAGAAAAAGGGTAAGAGTAGTAGTACTAACCCTAGTATTAGTAATAATAATTTGCAAGAGATTTTGGAGGAGTTCATGAAACAACAAATTCAAATGGAGGTGCAATGGCGAGAAGCTGCAGAAGCGAGAGAAGAGGAGAGAAGGGTGAAGGAGATGGAGTGGCGACAAACAATGGAGGTTTTGGAGAAAGAGAGGTTGATGATGGATATGAGATGGAGGGAGAGAGAAGAACAAAGAAGGGTACGAGAAGAAGCAAGAGCTGAGAAAAGGGATTCTCTCATTACAGCTCTTCTAAACAAGCTAAGACGTGAAAACATGTAG 777 0.4208 MDGHHHHLGVNIETGDRFPQWSLQETKEFLNIRAELDRTFMETKRNKLLWEVVSTKMKEKGYNRSTDQCKCKWKNLVTRYKGCETMEPEAMRQQFPFYNELQAIFTARMQRMLWLEAEGGGSSSLKKKGVRLSSDDEEDNEESDEEKGSSKKKKKGKSSSTNPSISNNNLQEILEEFMKQQIQMEVQWREAAEAREEERRVKEMEWRQTMEVLEKERLMMDMRWREREEQRRVREEARAEKRDSLITALLNKLRRENM* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02127 258 ProSiteProfiles Myb-like domain profile. 21 77 IPR001005 -
Eupl05g02127 258 Gene3D - 21 82 - -
Eupl05g02127 258 PANTHER FI21293P1 13 254 - -
Eupl05g02127 258 MobiDBLite consensus disorder prediction 120 168 - -
Eupl05g02127 258 CDD GT1 19 84 - -
Eupl05g02127 258 Pfam Myb/SANT-like DNA-binding domain 20 104 IPR044822 -
Eupl05g02127 258 FunFam Zinc finger and SCAN domain-containing 20 21 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02127 Eupl-Chr5 47697098 47698151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02127 4 257 Trihelix Transcription Factor Family AT2G38250 57.778 4.50e-74 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl05g02127 Myb_DNA-bind_4 1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02127 - - nnu:104602588 320.857