Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02116 ATGACGATAACTCCTCTCTCCGTCACCGTTACTCTTCTCTTCATCACGGTTATTTTCCCGACGGTGTTGGTACATGGGTTCGGCTCAGCTTCCACTATCGCCGTCAGCTACGGTTCCGGCACCGTTTGTGGCATATTGGCCGGAGAGCCCTATCAAAGGATCGAATGTTACCGGGCAGGTCAGAGGATCCGCATCGAACCGAACATTTCTTACGAAGCTATCTCCGGTGGTCGGAATTTCTTCTGCGGGCTGAGGTCCGGCGGATTAAGTTTCCTCTGTTGGGATTCTGGATTTTCTAACACAAGTTTTCAATCCAAACGGGTCTATTTCAATACTACCGTTAGATTGAGGGATTTAACGGTGGGGGAGGATCAGGTTTGCGCGATCGAGAACGGTACAGGGGTTGCTGATTGTTGGAGAGGAGAAGGAAACATGTTTCCGTCGCCGCCGAGGGTCGAACAGTTTCTGTCAATTACGTCGGGGAGAGGGTTTTCTTGTGGGATTTTGGAGACCAACAGTACAGTTCGTTGTTGGGGGAGTAATACTATGGGAGCGGAGATTCAGAACCAATTTGGGAACATTTCCATGCTAAGCTTAGTAGCTGGGGATTCTCATGTTTGTGGTTTGAATCAAACTGGGTTTTTGATTTGTAAAGGGAGCAACAATTCGGGGCAGCTGGGTGTTCCATTTTCTTCAGAAGCGTACGAGTTTTCTGGTTTGGCATTGGGAGTGCAACATAGCTGTGCAATTCGGACATTAAATGATTCAGTGGTTTGTTGGGGAGGAGGAGGAGAATTTTCCGGCAATGGCACGGAGGATTATTCGTTTGCGTCGATAGTTGCAGGTTCGAATTTCACTTGCGGATTGACGATGGCGAATTTCTCCCTGATTTGCTGGGGACCGGGCTGGTCTATGAACAATAATTCAGAAATGGTTCATCTATTGCCAAAGATTGTTCCAGGACCATGTACTGAAGCTTCATGTAGATGTGGTATATATCCTGACTCTGAAACTCTCTGTTCTGGTTCTGCTAATATATGCCGCCTATGTGACCAACCAGTGTCATCGTCACCTCCACCATTGCCACCGCCCCCACTTTCTCCACCATCGTCATCTTCGAAATCAAGAGACAGGGGTTTATTGGCTTTCGCCATTATTGGGTCAATTGGAATTTTTTCCGGTGTTTGCACTATTATATACTGCATGTGGACTGGAATTTGCTGCTGTAATCACAAGAAAATCCACAATTCCGTTCAACCCACAATTACGGGAGCAAATGCTAATTCTGCTCAGGCTGGTAGTGGTCCGTTCAGCCCACCTTTTTCGAGATCGTCCACCATCAGACGCCAGAGCTCTCGTGCAATGAGGCGGCAAAGAAGTGGGACATCGTCGAAGCACACCGAAAGGGCCGAGGAATTTTCTCTAGCAGAGCTTGCTGCTGCCACTGACGATTTCTCCTTGGAGAACAAGATTGGGGCCGGGAGTTTCGGGACAGTGTACAAGGGTAAGCTTACCGACGGTCGCAAAGTTGCGATCAAAAGGGGAGAAACTGGTACCAAGGCAAAGAAGTACCAAGAGAAAGAAAGCGCATTCCAGTCAGAATTAGCTTTCCTATCTCGTCTCCACCACAAACACCTTGTTGGGTTTGTGGGTTTTTGCGAAGAGAAGGATGAAAGGCTTCTGGTATACGAATTCATGAAAAATGGTGCACTCTACGATCATCTACATTCGAAGAACAACACCGAAAAAAGTAGCAGTCTTGTGAATTCATGGAAAATGAGGATTAAAATTTCATTAGATGCTGCAAGAGGGATTGAATATCTACACAATTACGCAGTACCACCTATAATTCATAGAGATATAAAATCTTCTAACATCTTATTGGATTCAAATTGGATGGCCAAAGTATCTGATTTCGGATTATCTTTAATGGGTCCAGAATTTGAAGGAGAGTATATGTCGATGAGGGCGGCGGGGACAGTTGGGTATATGGATCCTGAGTATTATGGACTAAACGTTCTGACTGCAAAAAGTGATGTTTATGGTCTTGGGGTGGTGTTGTTGGAGCTGTTGACAGGGAGGAGAGCGATATTCAAAGATGAAGAAGATGGAGGAGGTCCTATAAGCGTGGTGGACTTTACGGTGCCGAAGATTTTGGCGGGGGAGTTGGTGAGGGTGTTGGATGTGAGGGTGGGTGCACCGGAGATAAACGAAGCGGATGCTGTTGAGCTGGTGGCGTATACAGCTATACATTGTGTGAACTTGGAAGGGAAGGAGCGGCCGACCATGGCCGATATTGTGATGAACCTCGAGAGGGCGCTTGCTCTCTGTGATGACAGCCATGGTAGCATCTCTAGTGCTACAATCTCTATTGCCTCCGAGTGA 2385 0.4704 MTITPLSVTVTLLFITVIFPTVLVHGFGSASTIAVSYGSGTVCGILAGEPYQRIECYRAGQRIRIEPNISYEAISGGRNFFCGLRSGGLSFLCWDSGFSNTSFQSKRVYFNTTVRLRDLTVGEDQVCAIENGTGVADCWRGEGNMFPSPPRVEQFLSITSGRGFSCGILETNSTVRCWGSNTMGAEIQNQFGNISMLSLVAGDSHVCGLNQTGFLICKGSNNSGQLGVPFSSEAYEFSGLALGVQHSCAIRTLNDSVVCWGGGGEFSGNGTEDYSFASIVAGSNFTCGLTMANFSLICWGPGWSMNNNSEMVHLLPKIVPGPCTEASCRCGIYPDSETLCSGSANICRLCDQPVSSSPPPLPPPPLSPPSSSSKSRDRGLLAFAIIGSIGIFSGVCTIIYCMWTGICCCNHKKIHNSVQPTITGANANSAQAGSGPFSPPFSRSSTIRRQSSRAMRRQRSGTSSKHTERAEEFSLAELAAATDDFSLENKIGAGSFGTVYKGKLTDGRKVAIKRGETGTKAKKYQEKESAFQSELAFLSRLHHKHLVGFVGFCEEKDERLLVYEFMKNGALYDHLHSKNNTEKSSSLVNSWKMRIKISLDAARGIEYLHNYAVPPIIHRDIKSSNILLDSNWMAKVSDFGLSLMGPEFEGEYMSMRAAGTVGYMDPEYYGLNVLTAKSDVYGLGVVLLELLTGRRAIFKDEEDGGGPISVVDFTVPKILAGELVRVLDVRVGAPEINEADAVELVAYTAIHCVNLEGKERPTMADIVMNLERALALCDDSHGSISSATISIASE* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02116 794 Gene3D Phosphorylase Kinase; domain 1 445 565 - -
Eupl05g02116 794 SUPERFAMILY RCC1/BLIP-II 153 353 IPR009091 -
Eupl05g02116 794 ProSiteProfiles Protein kinase domain profile. 485 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g02116 794 Pfam Protein kinase domain 486 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g02116 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Eupl05g02116 794 FunFam receptor-like protein kinase FERONIA 448 565 - -
Eupl05g02116 794 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 193 780 IPR044815 GO:0004674
Eupl05g02116 794 ProSitePatterns Protein kinases ATP-binding region signature. 491 513 IPR017441 GO:0005524
Eupl05g02116 794 MobiDBLite consensus disorder prediction 427 449 - -
Eupl05g02116 794 Gene3D Transferase(Phosphotransferase) domain 1 566 784 - -
Eupl05g02116 794 Gene3D - 188 313 IPR009091 -
Eupl05g02116 794 MobiDBLite consensus disorder prediction 427 470 - -
Eupl05g02116 794 FunFam Serine/threonine-protein kinase-like protein CCR4 566 788 - -
Eupl05g02116 794 SUPERFAMILY Protein kinase-like (PK-like) 465 770 IPR011009 -
Eupl05g02116 794 Gene3D - 25 187 IPR009091 -
Eupl05g02116 794 SMART serkin_6 485 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02116 Eupl-Chr5 47503134 47505939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02116 6 794 Receptor kinase-like Gene Family AT3G55950 55.879 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Eupl05g02116 Pkinase 2.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02116 - - tss:122658104 1057.74