Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02115 ATGCAGAACTGTGATCATGAAATCTTGCCGGTGCGGAAGCTTGAAGAAAGAGATTTAGCCTGCGAAAGAAAGTGTCAACGATTACGAGATTGTGGGCGCCATGCTTGTAAACGTCGTTGCTGTGATGGGGACTGCCCACCCTGCTCAGAGATTTGTGGCAGGAAGCTTCGGTGTAATAACCATAAATGCCCTTCTCCATGCCACAGAGGTGCCTGTGCTCCTTGTCCATTGATGGTGACTGTTTCATGCTTATGTGGGGAGACACACTTTGAGGTTCCCTGTGGGGCTGAATCAGAGCAAAAGCCTCCCAGATGTCCCAAACCATGTCGTATATCTCCTTTATGCAGGCATGGGTCAAATTGCAAGCCACACAAATGCCACTATGGAGCTTGTCCACCTTGTCGGCTAATTTGTGAGGAAGAATTTCCGTGTGGGCACAAGTGTAAACTAAGGTGCCATGGTCCTAAACCTGCTCCTAACCCTGACTTCACATTAAAACCAAAGAAAAAGAAGTCAAATCGGCAGCCTGAATGTACCCCTGGATCACCATGCCCTCCTTGTTCAGAACTCGTTTGGAGGTCGTGCCTTGGCCAGCACATCGGAGCAGAGCAGATGATGGTCTGCTCTAATAGAGCAGCATTTTCATGTGACAACTTGTGTGGAAACCTTCTTCGCTGTGGAAATCATCATTGTACGAAACCTTGTCATGCTCTGAAGAGCCATACCTCAGCATTGGGTCTGCATGTAAGAACCGAGACCTGTGACGAGTGTGATCTCCCTTGCCAAAAGGAGAGGAAGGCTGCGTGCCCACATCCTTGCCCACTACCATGCCATCCTGGAGATTGTTCCCTTTGCAAAGTACTTATCAAACGGTCATGTCATTGTGGTGCCATGGTCCATGTTTTTGAGTGCACGTACTACAACAGCTTGCCCGAAAAGGAGCAACTGAGTATTCGTTCATGTGGCGGACCCTGCCATAGAAAATTACCAAACTGTTCACATCTATGTCCTGAGACGTGCCATCCCGGTCAATGCCCATTACCTGACAAGTGTTACAAAAAGGTTAATGTTCGTTGTGCGTGTCAAAACCTGAAAAAGGAGTGGCTATGTCAAGACGCTCAAGCAGCCTATTGTAATACTGGACGTGATCCAAAAGATATCTTGAAAAATCAATTTGGAATTGGCCTAATTCCTTGCAATTCAGAATGTGCTAGTAAAGTAAAAGTTGTAGATTCGGAGTTGCAGTTCCGGAAACCTAAAGTTTCAGAGAACAAGGAGGCAGATGCCGAAAAAAATGTGTCAAAGCGTAGAAAGAGACGTGAGCGGGTACAAGAAGCTAAGCAAATTTCAAGGCTGCAGATAATTTGTGCAACCCTGTGGCGATATCTCATATTTATTTCCATAGCTGTGGCTGTAATTGCAGTCACATACTATGGTTACAAGGGTCTCCTCCGGCTATCCGATTGGATGAATGAAGTTGAAGAAAGAAGACAGGGAAAACGATTTCCGGGAATCTGA 1518 0.4638 MQNCDHEILPVRKLEERDLACERKCQRLRDCGRHACKRRCCDGDCPPCSEICGRKLRCNNHKCPSPCHRGACAPCPLMVTVSCLCGETHFEVPCGAESEQKPPRCPKPCRISPLCRHGSNCKPHKCHYGACPPCRLICEEEFPCGHKCKLRCHGPKPAPNPDFTLKPKKKKSNRQPECTPGSPCPPCSELVWRSCLGQHIGAEQMMVCSNRAAFSCDNLCGNLLRCGNHHCTKPCHALKSHTSALGLHVRTETCDECDLPCQKERKAACPHPCPLPCHPGDCSLCKVLIKRSCHCGAMVHVFECTYYNSLPEKEQLSIRSCGGPCHRKLPNCSHLCPETCHPGQCPLPDKCYKKVNVRCACQNLKKEWLCQDAQAAYCNTGRDPKDILKNQFGIGLIPCNSECASKVKVVDSELQFRKPKVSENKEADAEKNVSKRRKRRERVQEAKQISRLQIICATLWRYLIFISIAVAVIAVTYYGYKGLLRLSDWMNEVEERRQGKRFPGI* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02115 505 Pfam NF-X1 type zinc finger 125 135 IPR000967 GO:0005634|GO:0008270
Eupl05g02115 505 Pfam NF-X1 type zinc finger 271 286 IPR000967 GO:0005634|GO:0008270
Eupl05g02115 505 Pfam NF-X1 type zinc finger 332 350 IPR000967 GO:0005634|GO:0008270
Eupl05g02115 505 Pfam NF-X1 type zinc finger 226 236 IPR000967 GO:0005634|GO:0008270
Eupl05g02115 505 Pfam NF-X1 type zinc finger 144 153 IPR000967 GO:0005634|GO:0008270
Eupl05g02115 505 Pfam NF-X1 type zinc finger 52 76 IPR000967 GO:0005634|GO:0008270
Eupl05g02115 505 Pfam NF-X1 type zinc finger 31 49 IPR000967 GO:0005634|GO:0008270
Eupl05g02115 505 CDD NF-X1-zinc-finger 48 96 - -
Eupl05g02115 505 CDD NF-X1-zinc-finger 21 69 - -
Eupl05g02115 505 SMART znfxneu3 58 77 IPR000967 GO:0005634|GO:0008270
Eupl05g02115 505 SMART znfxneu3 269 287 IPR000967 GO:0005634|GO:0008270
Eupl05g02115 505 SMART znfxneu3 31 50 IPR000967 GO:0005634|GO:0008270
Eupl05g02115 505 SMART znfxneu3 332 353 IPR000967 GO:0005634|GO:0008270
Eupl05g02115 505 SMART znfxneu3 121 136 IPR000967 GO:0005634|GO:0008270
Eupl05g02115 505 SMART znfxneu3 226 256 IPR000967 GO:0005634|GO:0008270
Eupl05g02115 505 SMART znfxneu3 144 189 IPR000967 GO:0005634|GO:0008270
Eupl05g02115 505 MobiDBLite consensus disorder prediction 161 184 - -
Eupl05g02115 505 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 134 449 IPR034078 GO:0003700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-X1 Eupl05g02115 zf-NF-X1 1.5e+02 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02115 K15683 - nnu:104594892 874.774