Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02099 ATGGCCTCATCACAAGAACACTGGAATAGCTTGGAGAACGGCAACGTCATCAAGGGCTTAAGCAAGGAGATCCGGCACGGACGGACGGCTCACAACATGTCGTCTTCTTCGTTGCGCAAGAAGTCCGATCTCACACTTGTGTCGAGGGTGCGAATTGGATTTCTCAGGCAATTCCTCATGAATCTCCAAGAGGTCTTCTTGGGGACTAAGCTGTCCGTTCTCTTCCCGGCCATTCCTCTAGCAATTGTTGCCGAGTGTTATAATTTTGGAAGACCATGGATATTTGGTCTGAGTTTACTAGGGCTCACCCCACTTGCTGAACGTGTCAGCTTCCTCACTGAACAACTTGCAATCTACACTGGTCCAACAGTTGGTGGGCTTCTTAATGCAACATGTGGCAATGCAACAGAGCTCATTATAGCATTGCTTGCTCTGTATAGAAGAAAAATTGATGTAGTGAAGTACTCTCTATTGGGTTCTATTATATCAAACCTACTTCTTGTTCTTGGGACTTCTCTCTTCTGTGGAGGCCTAGCCAACATAAAGAAGGAACAAAAATATGACAGAAAGCAAGCTGACGTGAACTCGCTACTATTGTTGATGGGCTTGTTGTGCCACATGCTACCATTGATGTTCAGATACGCGTCTACCTCCGGTGCACTCATCGTCGATTCCAATCTCCAGATGTCGAGGGCGAACAGCATCGTCATGCTAATCGCCTACATCGCGTATCTCTTTTTCCAATTGAAGACTCATCGGCAGCTATTTGAAGCGCAAGAGGAAGATGATGGTGACGATGTTACTTCTGAAGAAGAGGCCGTGATAGGATTCTGGAGTGCATTTGCTTGGTTGGCAGGGATGACGGGAGTCATAGCTTTGTTATCGGAGTATGTCGTGGGTACGATCGAGGATGCATCAGATTCTTGGGGAATTTCCGTCAGCTTCATTAGCATAATCTTGCTACCCATCGTCGGAAATGCCGCTGAACATGCGGGTGCCATCATATTCGCTTTTAAGAACAAGCTCGATATATCTTTAGGTGTTGCTTTGGGGTCTGCAACTCAAATTTCTATGTTTGTGATTCCCTTAACTGTGATCATTGCATGGATAATGGGTATCCAAATGGATCTTGATTTTAACCTCCTTGAGACTGGTTCTCTGGCTTTATCAGTACTGGTCACAGCCTTCACCTTACAGGATGGCACTTCACACTACATGAAAGGATTGGTTCTACTGCTTTGCTACATTGTCATCGCGGCATGTTTTTTCGTCCTCAAAACTCCACTCAAACCAACAAATGTCCTCAACTTGGGATTTGACTCATCATCTGGAGGGACATTGATAGCTTGA 1350 0.4556 MASSQEHWNSLENGNVIKGLSKEIRHGRTAHNMSSSSLRKKSDLTLVSRVRIGFLRQFLMNLQEVFLGTKLSVLFPAIPLAIVAECYNFGRPWIFGLSLLGLTPLAERVSFLTEQLAIYTGPTVGGLLNATCGNATELIIALLALYRRKIDVVKYSLLGSIISNLLLVLGTSLFCGGLANIKKEQKYDRKQADVNSLLLLMGLLCHMLPLMFRYASTSGALIVDSNLQMSRANSIVMLIAYIAYLFFQLKTHRQLFEAQEEDDGDDVTSEEEAVIGFWSAFAWLAGMTGVIALLSEYVVGTIEDASDSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQISMFVIPLTVIIAWIMGIQMDLDFNLLETGSLALSVLVTAFTLQDGTSHYMKGLVLLLCYIVIAACFFVLKTPLKPTNVLNLGFDSSSGGTLIA* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02099 449 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 25 426 IPR004713 GO:0006812|GO:0008324|GO:0016020
Eupl05g02099 449 FunFam Vacuolar cation/proton exchanger 122 266 - -
Eupl05g02099 449 NCBIfam calcium/proton exchanger 57 423 - -
Eupl05g02099 449 Gene3D - 122 424 IPR044880 -
Eupl05g02099 449 Pfam Sodium/calcium exchanger protein 280 421 IPR004837 GO:0016020|GO:0055085
Eupl05g02099 449 Pfam Sodium/calcium exchanger protein 93 249 IPR004837 GO:0016020|GO:0055085
Eupl05g02099 449 FunFam Vacuolar cation/proton exchanger 268 424 - -
Eupl05g02099 449 NCBIfam calcium/proton exchanger 76 423 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02099 Eupl-Chr5 47254223 47260344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02099 6 428 Antiporters AT2G38170 72.326 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02099 K07300 - ming:122071294 690.649