Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02066 ATGCCGAGTATAATCGGAAATGGTTCCTCTGCATTCTACAATGAACTCGAAGACAAAGAGAAGAGATCAATCAAAGTGGAGAGATCCGAAAAGATTCGATCCAAGGGAGATTCCACGCCCCAAAAAAGGCGATCTAGATCCGAAACGACGCAAGAAGGTCCAATCTCTAATCCGCCGAAACCGTGCTCTCCACCGAAATGGAAATCGCCTCGCAGATGCATCAATGGCAGCCCAAACAGCGATGCAAGTGGAATTTGCAAGGCATCTGACATTAAGCATACAGAATCACCCAAAAAAATGCCAAGAAAAAGATTGTCCGATAGTTTTCCGAAGAAATCCAAATGGAATCCGAAAGATTCCGAGCAGATGAGCACCCTGAAGGAAGTATTACATGTATCTACGGCACCATCTGCTATTGTGTGCAGGGAGGAAGAGCAGAGAAGGGTGTTGGAGTTCTGCAAGGTGTGCATAGAGCAGGAAAAAGCAGGGAGTTTATATGTATGTGGGTGTCCAGGGACTGGGAAAACACTGTCCATGGAGAAAGTGAAACAACTCCTGGTTGGATGGGTAAAAGAGGCAGGAGTTCAGCTACCAGATGTAATAGCTATGAATTGCACTTCCCTTACAAATGCTTGTGAAATTTTTAGCAAGATTCTTGAGAAGTATCAACCCCGAAAGAAGACCAATGGTACTTTGTCACCTCTTCAGCACCTTCAAAACATGTTTTCTCAGAAGAAGCAATCATCTGGTGAGAAGATGATGCTAATAATTGCTGATGAGTTGGATTATTTGATTACTAGAGACCGGTCTGTACTTCATGATCTTTTCATGCTTACAACTCTCCCATTCTCCAGATGTATTTTAATAGGGATAGCAAATGCAATAGACCTAGCTGACCGGTTTCTGCCAAAACTTCAATCATTGAATTGCAAGCCTTTGATTGTAACTTTTCGGGCCTACTCTAAAGATCAGATCCTCAGGATTCTTCAACAAAGGCTTATGGCTCTTCCATATGATGTTTTTCAACCTCAAGCATTGGAGCTTTGTGCCAGAAAAGTTGCAGCTGCATCTGGAGATATGAGGAAAGCTCTTTGTGTCTGCAGGAGTGCAATCGAGATTTTAGAGGCAGAGCTAAGAGATCCTAGTAGCAAGATGAATTTGTTACAGGTAGAGAATGCATCACCCGGTCACTCAATAGCTCCTGCAACTGAAGTCATACTGAAGCAAGAAATCAACATTATAAGGGTCGATCATATGGCTATTGCTTTGTCAAGAACATTTAAGTCAGCAATAGTGGACACTATACAATCTCTTCCCCAACATCAACAGATAATACTTTGCTCCACGGTGAAGCTTTTTGGTAGAGGAAAGAAGTATACCACTGTCGGAGAGCTGAATAGATCTTACTCCGACATCTGCAAATCAGCACTAATTCCTCCCTCCGGCATTCTGGAATTTTCAAATATGTGTAGAGTGCTCAGTGACCAGGGCCTTCTCAAACTTGGTCAATCTCGAGAAGATAAATTGAAGAGAGTAACACTAAAAGTTGATGAATCAGACATTACCTTTGCCTTGCAGGGAATTCGTTTCTTTCGGAATTGTCTTCAGTAA 1611 0.4246 MPSIIGNGSSAFYNELEDKEKRSIKVERSEKIRSKGDSTPQKRRSRSETTQEGPISNPPKPCSPPKWKSPRRCINGSPNSDASGICKASDIKHTESPKKMPRKRLSDSFPKKSKWNPKDSEQMSTLKEVLHVSTAPSAIVCREEEQRRVLEFCKVCIEQEKAGSLYVCGCPGTGKTLSMEKVKQLLVGWVKEAGVQLPDVIAMNCTSLTNACEIFSKILEKYQPRKKTNGTLSPLQHLQNMFSQKKQSSGEKMMLIIADELDYLITRDRSVLHDLFMLTTLPFSRCILIGIANAIDLADRFLPKLQSLNCKPLIVTFRAYSKDQILRILQQRLMALPYDVFQPQALELCARKVAAASGDMRKALCVCRSAIEILEAELRDPSSKMNLLQVENASPGHSIAPATEVILKQEINIIRVDHMAIALSRTFKSAIVDTIQSLPQHQQIILCSTVKLFGRGKKYTTVGELNRSYSDICKSALIPPSGILEFSNMCRVLSDQGLLKLGQSREDKLKRVTLKVDESDITFALQGIRFFRNCLQ* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02066 536 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 377 IPR027417 -
Eupl05g02066 536 SMART Cdc6_C_2 446 525 IPR015163 -
Eupl05g02066 536 FunFam Cell division control protein 438 528 - -
Eupl05g02066 536 Pfam AAA domain 160 281 IPR003593 GO:0016887
Eupl05g02066 536 Gene3D - 436 526 IPR036388 -
Eupl05g02066 536 Gene3D - 119 308 IPR027417 -
Eupl05g02066 536 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 17 534 - -
Eupl05g02066 536 Pfam CDC6, C terminal winged helix domain 446 524 IPR015163 -
Eupl05g02066 536 MobiDBLite consensus disorder prediction 91 118 - -
Eupl05g02066 536 CDD Cdc6_C 439 521 IPR015163 -
Eupl05g02066 536 Gene3D - 309 435 - -
Eupl05g02066 536 MobiDBLite consensus disorder prediction 1 122 - -
Eupl05g02066 536 FunFam Cell division control protein 309 435 - -
Eupl05g02066 536 FunFam Cell division control protein 120 308 - -
Eupl05g02066 536 PIRSF Cdc6 7 536 IPR016314 GO:0006270|GO:0051301
Eupl05g02066 536 MobiDBLite consensus disorder prediction 14 49 - -
Eupl05g02066 536 SUPERFAMILY "Winged helix" DNA-binding domain 431 534 IPR036390 -
Eupl05g02066 536 Pfam AAA lid domain 342 376 IPR041083 -
Eupl05g02066 536 CDD AAA 145 307 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02066 1 535 Core DNA Replication Machinery Family AT2G29680 59.410 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02066 K02213 - nnu:104601234 754.977