Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02057 ATGGCGACCGTAAGATCCTTCTTCACCAGTTTCATCTCCTTGGTTCTTCTTCTCTTCCATCTGGGTTGCTTTATCTTCACAACCAATGATCGTCCTTCCACCAAGAAACGAAAGGTATCCCCTCTATCTCCTTCCTCTCCTTCTCCATCTCTTCTAAAACCTCACAAAGCCCTCTCCTCTTCTTGGTCCTACATCAAACGGGTTGTCTTCTTCAAGAACTCAAAGAAAGATAATGAAACCCGCCCCACAACACCAACCATAGCCTCTGCCAGATCATCTCAACAATCGATCGTAGTGGTCGTAACGCCAACTGATACAATCTTATCGGCTCCTCCACCACGCAAAAGACGAACAGGGGCTCGCTCAGAACCCGATATCTTGCTCGATCACTCATCGTTTCCTCTCCGAAACGATATCTTTCCTTGCCCAGCATGTGGGGAGATTTTCCACAAAACCCAACTTCTTGAACAGCACCAGTCGATCAAGCACGCGGTTTCAGAGCTTTTCGATGGGGATTCAGGAAAAAATATAGTCCGAATCATCTTTAAAACGGGTTGGAACAATAAAGAGAAGAACCCAATAATACATCGGATCCTCAAAATTCATAACAGCCCAAAAATCCTCGCCAGGTTCGAAGAGTACAGGGAGTCTGTGAAGTCTAAAGCAGCAAGAAACGGTGTACGAAGACGAGACGAGAGGTGCATTGCAGACGGTAACGAGCTTCTGAGGTTTAACTGTTCGACGTTTATTTGTAATTTGGGACAGAACGGGAATTCTTGTCTTTGTACCCAGCAGTACTGCAGCGTATGTGGGATCATACGTTCTGGGTTCTCAGCTAAGATGGATGGGATATCGACGCTCTCGAGCAGCTGGAGAGCACACGCGGTGATCCCTGATGAGCTCGAGGAGGAGTTCGCTTTCATGAACGTGAAGCGCGCGATGCTGGTTTGCCGGGTCATAGCGGGAAGGGTCGGGAGTGACCAGGGGATCCTTGACAAGGACGAGCCCGGGTTTGACTCGGTCGTCGGAAGAGGAGGTAGTGGGGTCCACGCCAGGTTTGACGATGATGAGCTCTTGGTCTTCAATCCTAGGGCTGTGCTTCCTTGCTTTGCGATTATATACAGCGTGTAA 1131 0.4881 MATVRSFFTSFISLVLLLFHLGCFIFTTNDRPSTKKRKVSPLSPSSPSPSLLKPHKALSSSWSYIKRVVFFKNSKKDNETRPTTPTIASARSSQQSIVVVVTPTDTILSAPPPRKRRTGARSEPDILLDHSSFPLRNDIFPCPACGEIFHKTQLLEQHQSIKHAVSELFDGDSGKNIVRIIFKTGWNNKEKNPIIHRILKIHNSPKILARFEEYRESVKSKAARNGVRRRDERCIADGNELLRFNCSTFICNLGQNGNSCLCTQQYCSVCGIIRSGFSAKMDGISTLSSSWRAHAVIPDELEEEFAFMNVKRAMLVCRVIAGRVGSDQGILDKDEPGFDSVVGRGGSGVHARFDDDELLVFNPRAVLPCFAIIYSV* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02057 376 MobiDBLite consensus disorder prediction 32 55 - -
Eupl05g02057 376 Gene3D - 183 376 - -
Eupl05g02057 376 ProSiteProfiles Zinc finger C2H2 type domain profile. 140 168 IPR013087 -
Eupl05g02057 376 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 72 374 - -
Eupl05g02057 376 ProSitePatterns Zinc finger C2H2 type domain signature. 142 163 IPR013087 -
Eupl05g02057 376 MobiDBLite consensus disorder prediction 38 55 - -
Eupl05g02057 376 SUPERFAMILY ADP-ribosylation 166 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02057 Eupl-Chr5 46500425 46501909 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02057 62 376 C2H2 Transcription Factor Family AT2G29660 58.182 2.17e-114 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Eupl05g02057 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02057 - - nnu:104601227 539.65