Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02048 ATGCCTTCTTCGCCTTCTGTAACGACTCTTGTTTCTAGATGCACCGTTTACCCAGAAAGTGAAACTTCCATCGGAAAGCTCAAACTTTCCGTCTCAGATCTCCCTATGCTTTCTTGCCAATATATACAAAAGGGCGTTTTACTCACTCGCCCTCCTCTTTCCATTGATGCTCTCGTCACTCTCCTTAAGCGCGGCCTCTCTCAGACTCTGACGCACTTTCCACCGTTAGCTGGCCGTCTTATGACAGATTCTGATGAGTACGTCCATGTCACTTGTAACGACGCTGGCGTCGACTTCATCCACGCCAATGCTCGCCACGTGTCCATCCGCGACATTCTCTCACCCGTCGATGTGCCAAATTCTGTTAAAGATTTTTTCACCTTTGACGGCACCGTCAGTTATGATGGTCATTTTAATCCGATTGCGGCCGTCAAGGTGACGGAGCTCGCTGATGGCATCTTTATTGGTTGCGCCGTCAACCACGCCGTTACTGACGGGACATCGTTCTGGAATTTTTTCAATACATTTGCGGAGGTATGTAGAGGAGTTGGGAGAATCTCTAGGCCACCGAATTTTCGCCGAAATTTCGTGAAAGATTCTCCGGCGGTACTTAGATTCCCTGACGGTGCTCCGAAAGTTACGTTTGATGTCAACGCGCCATTACGGGAGAGGATCTTTCATTTCAGCAGAGAAGCGATTCTCAAGCTGAAATCGAGAGCAAATTGTCCGTTAGTGAAACAGTTGGATAACGGGTTTGCTGATGCTGTTGAAATACTGGGGAAGCAAAGTAACGACGGCTGGAAGATCCATGGAGGAGAGAACCAGAAGGTCCAGAACCCTAACGGAAACATAACGTCAGTTCTGGAGAGCTTGTTGAGAAGCGCCGTTTTGAAGCCCCAAGGATCCGAAACAGAAACCAAAAACCCCAATCAGACGGCGGAGATCTCATCCTTCCAGTCTCTGTGCGCTCAGGTCTGGCGTTCGATCACACGGTCGAGAAAGCTTACACCGTCCAAGACGACCACGTTTCGAATGGCCGTGAATTGCCGTCACAGGCTCGAGCCGCGGCTTGATCCGTACTACTTTGGCAACGCGATACAGAGCATCCCGACAGTTGCTTCAGCAGGGGAGATCCTGTCTCGGGATCTTCGCTGGTGCGCAGGTTTGCTGCACAAAAACGTGGTTGCTCATGACGACACTACTGTGCGCCGGGGTGTAGAGGACTGGGAGAAGAACCCGCGGTGCTTCCCGCTAGGGAACCTTGATGGTGCATCGATCACAATGGGAAGCTCCCCGAGATTCCCGATGTACGATAATGACTTCGGATGGGGGCGACCGTTGGCAGTTCGTAGCGGGAGGGCGAACAAGTTCGACGGTAAGTTATCGGCGTTTCCAGGGAGAGAAGGTGGAGGGAGCGTTGATGTCGAGATGTGCTTGGCACCCGAAACGATGGCGGAGCTGGAGACTGATACCGAGTTCATGCAGTATGTATCCGATATATCTTGA 1506 0.5139 MPSSPSVTTLVSRCTVYPESETSIGKLKLSVSDLPMLSCQYIQKGVLLTRPPLSIDALVTLLKRGLSQTLTHFPPLAGRLMTDSDEYVHVTCNDAGVDFIHANARHVSIRDILSPVDVPNSVKDFFTFDGTVSYDGHFNPIAAVKVTELADGIFIGCAVNHAVTDGTSFWNFFNTFAEVCRGVGRISRPPNFRRNFVKDSPAVLRFPDGAPKVTFDVNAPLRERIFHFSREAILKLKSRANCPLVKQLDNGFADAVEILGKQSNDGWKIHGGENQKVQNPNGNITSVLESLLRSAVLKPQGSETETKNPNQTAEISSFQSLCAQVWRSITRSRKLTPSKTTTFRMAVNCRHRLEPRLDPYYFGNAIQSIPTVASAGEILSRDLRWCAGLLHKNVVAHDDTTVRRGVEDWEKNPRCFPLGNLDGASITMGSSPRFPMYDNDFGWGRPLAVRSGRANKFDGKLSAFPGREGGGSVDVEMCLAPETMAELETDTEFMQYVSDIS* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02048 501 Gene3D - 8 205 IPR023213 -
Eupl05g02048 501 Gene3D - 208 489 IPR023213 -
Eupl05g02048 501 Pfam Transferase family 9 494 - -
Eupl05g02048 501 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 11 495 - -
Eupl05g02048 501 SUPERFAMILY CoA-dependent acyltransferases 27 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02048 Eupl-Chr5 46420796 46422958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02048 283 488 Monolignol Biosynthesis Gene Families AT5G48930 32.075 4.42e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02048 - - ming:122086309 811.986